Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 USP9YP36-201ENST00000424581 829 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-2O95096 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-2O95096 RPS23P3-201ENST00000470993 430 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 RPL31P60-201ENST00000478450 367 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.37□□□□□ -1.87
NKX2-2O95096 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
NKX2-2O95096 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-2O95096 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-2O95096 RANP9-201ENST00000519957 271 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-2O95096 AP001804.3-201ENST00000525146 880 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AP003072.2-201ENST00000527756 676 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 AC004024.1-201ENST00000549244 247 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 AC124947.2-202ENST00000552735 133 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 MTND1P15-201ENST00000579262 949 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 BNIP3P33-201ENST00000598912 569 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AC091805.2-201ENST00000603848 235 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AL136363.2-201ENST00000604173 851 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 Z99129.1-201ENST00000612510 255 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 CR848007.1-201ENST00000442354 1699 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 EXOC5P1-201ENST00000510543 1969 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NKX2-2O95096 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX2-2O95096 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 RNU5E-6P-201ENST00000365574 115 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 SNORA20.2-201ENST00000383922 131 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 RNU2-36P-201ENST00000410361 191 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 RNU2-66P-201ENST00000410650 161 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AL513331.1-201ENST00000411908 397 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 MTCO3P41-201ENST00000414801 328 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 BX842559.1-201ENST00000419615 532 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC010975.2-201ENST00000427781 588 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 RPL31P35-201ENST00000431058 377 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX2-2O95096 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 NOTCH2P1-201ENST00000443481 624 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC079448.1-201ENST00000449377 373 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 MTND2P24-201ENST00000453434 806 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC138853.1-201ENST00000503549 823 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 MTND2P33-201ENST00000506452 1031 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 RNU6-390P-201ENST00000516259 103 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 MIR2114-201ENST00000516645 80 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC087883.1-201ENST00000551882 391 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 RPS3AP4-201ENST00000555161 764 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.36□□□□□ -1.87
NKX2-2O95096 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AC244505.7-201ENST00000599675 272 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AC068790.2-201ENST00000602601 557 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AC073648.5-201ENST00000603502 305 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AL139286.2-201ENST00000606838 396 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 AL390240.1-201ENST00000612950 384 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 FRG1KP-201ENST00000623592 341 ntBASIC3.36□□□□□ -1.87
NKX2-2O95096 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX2-2O95096 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-2O95096 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
NKX2-2O95096 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-2O95096 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-2O95096 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-2O95096 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-2O95096 SNORD56.2-201ENST00000363242 71 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 RNU6-1042P-201ENST00000384204 107 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-2O95096 U3.39-201ENST00000408569 239 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-2O95096 BX295541.1-201ENST00000417774 250 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 ZNF90P2-204ENST00000419323 1075 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AL590383.1-201ENST00000428602 75 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms