Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 LINC02555-201ENST00000563933 1951 ntBASIC4.85□□□□□ -1.63
ALX3O95076 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ALX3O95076 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ALX3O95076 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.85□□□□□ -1.63
ALX3O95076 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.85□□□□□ -1.63
ALX3O95076 AL159987.1-201ENST00000347911 293 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RNA5SP326-201ENST00000363209 110 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RNU6-595P-201ENST00000363944 107 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RNVU1-3-201ENST00000364313 161 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RNA5SP500-201ENST00000364486 119 ntBASIC4.85□□□□□ -1.63
ALX3O95076 Y_RNA.533-201ENST00000384596 114 ntBASIC4.85□□□□□ -1.63
ALX3O95076 SNORA48.4-201ENST00000391089 134 ntBASIC4.85□□□□□ -1.63
ALX3O95076 COX6CP10-201ENST00000416832 224 ntBASIC4.85□□□□□ -1.63
ALX3O95076 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.85□□□□□ -1.63
ALX3O95076 OR2AH1P-201ENST00000425717 928 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC092423.1-201ENST00000430165 186 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
ALX3O95076 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.85□□□□□ -1.63
ALX3O95076 AL513124.1-201ENST00000450410 614 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.85□□□□□ -1.63
ALX3O95076 AC087190.1-201ENST00000484462 480 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC107032.1-201ENST00000485945 480 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC231760.1-201ENST00000498002 260 ntBASIC4.85□□□□□ -1.63
ALX3O95076 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
ALX3O95076 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.85□□□□□ -1.63
ALX3O95076 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.85□□□□□ -1.63
ALX3O95076 AC103783.1-201ENST00000520506 373 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC025884.1-201ENST00000556034 378 ntBASIC4.85□□□□□ -1.63
ALX3O95076 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.85□□□□□ -1.63
ALX3O95076 SULT1C2P2-201ENST00000562517 294 ntBASIC4.85□□□□□ -1.63
ALX3O95076 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 AC136932.1-201ENST00000574771 208 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.85□□□□□ -1.63
ALX3O95076 LRRC37A5P-203ENST00000580181 585 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RN7SL52P-201ENST00000584271 284 ntBASIC4.85□□□□□ -1.63
ALX3O95076 NF1P5-201ENST00000588287 448 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 AL121917.1-203ENST00000605534 577 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RN7SL787P-201ENST00000613000 284 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RN7SL544P-201ENST00000617232 284 ntBASIC4.85□□□□□ -1.63
ALX3O95076 RN7SL763P-201ENST00000620922 284 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC074140.1-201ENST00000621617 208 ntBASIC4.85□□□□□ -1.63
ALX3O95076 AC091953.5-201ENST00000622919 233 ntBASIC4.85□□□□□ -1.63
ALX3O95076 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ALX3O95076 RLIMP1-201ENST00000339626 1680 ntBASIC4.85□□□□□ -1.63
ALX3O95076 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ALX3O95076 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ALX3O95076 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ALX3O95076 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
ALX3O95076 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
ALX3O95076 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ALX3O95076 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ALX3O95076 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ALX3O95076 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ALX3O95076 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ALX3O95076 AL359893.1-201ENST00000447628 1580 ntBASIC4.84□□□□□ -1.63
ALX3O95076 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ALX3O95076 RNA5SP30-201ENST00000365552 115 ntBASIC4.84□□□□□ -1.63
ALX3O95076 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ALX3O95076 RNU6-817P-201ENST00000391083 104 ntBASIC4.84□□□□□ -1.63
ALX3O95076 SPTLC1P2-201ENST00000407089 121 ntBASIC4.84□□□□□ -1.63
ALX3O95076 RNU4-34P-201ENST00000410431 124 ntBASIC4.84□□□□□ -1.63
ALX3O95076 RNU6-607P-201ENST00000411283 108 ntBASIC4.84□□□□□ -1.63
ALX3O95076 MRPL53P1-201ENST00000414323 319 ntBASIC4.84□□□□□ -1.63
ALX3O95076 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.84□□□□□ -1.63
ALX3O95076 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.84□□□□□ -1.63
ALX3O95076 RPL21P90-201ENST00000415692 466 ntBASIC4.84□□□□□ -1.63
ALX3O95076 BX842559.1-201ENST00000419615 532 ntBASIC4.84□□□□□ -1.63
ALX3O95076 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.84□□□□□ -1.63
ALX3O95076 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.84□□□□□ -1.63
ALX3O95076 OR4C10P-201ENST00000434991 931 ntBASIC4.84□□□□□ -1.63
ALX3O95076 AC073465.2-201ENST00000440938 498 ntBASIC4.84□□□□□ -1.63
ALX3O95076 FHP1-201ENST00000442741 703 ntBASIC4.84□□□□□ -1.63
ALX3O95076 RPL36AP39-201ENST00000445859 318 ntBASIC4.84□□□□□ -1.63
ALX3O95076 NDUFB4P10-201ENST00000452541 359 ntBASIC4.84□□□□□ -1.63
ALX3O95076 AC009120.1-201ENST00000493458 473 ntBASIC4.84□□□□□ -1.63
ALX3O95076 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.84□□□□□ -1.63
ALX3O95076 AC091912.1-201ENST00000511351 248 ntBASIC4.84□□□□□ -1.63
ALX3O95076 SNORA31.3-201ENST00000516029 96 ntBASIC4.84□□□□□ -1.63
ALX3O95076 RNU6-1278P-201ENST00000516130 107 ntBASIC4.84□□□□□ -1.63
ALX3O95076 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
ALX3O95076 TRAV32-201ENST00000553993 340 ntBASIC4.84□□□□□ -1.63
ALX3O95076 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.84□□□□□ -1.63
ALX3O95076 AMZ2P1-203ENST00000565833 850 ntBASIC4.84□□□□□ -1.63
ALX3O95076 Z83818.1-201ENST00000603584 150 ntBASIC4.84□□□□□ -1.63
ALX3O95076 MIR376A1-201ENST00000616574 68 ntBASIC4.84□□□□□ -1.63
ALX3O95076 AC018445.2-201ENST00000622987 260 ntBASIC4.84□□□□□ -1.63
ALX3O95076 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ALX3O95076 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ALX3O95076 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ALX3O95076 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ALX3O95076 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ALX3O95076 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ALX3O95076 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.84□□□□□ -1.64
ALX3O95076 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ALX3O95076 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms