Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SDCBPP3-201ENST00000419629 891 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC008850.1-201ENST00000427546 362 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AL606489.2-201ENST00000433886 234 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL5O76039 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.33□□□□□ -1.72
CDKL5O76039 SEPT14P3-201ENST00000439401 183 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL5O76039 AL732372.2-207ENST00000445840 183 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL5O76039 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL5O76039 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL5O76039 SEPT14P2-201ENST00000453405 183 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 HMGN2P7-201ENST00000456186 273 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 RPS20P24-201ENST00000457473 361 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 RPL30P11-201ENST00000495304 339 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL5O76039 TXNP6-201ENST00000510190 310 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 NPM1P41-201ENST00000512920 831 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 SEPT14P4-201ENST00000513445 186 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC093677.1-201ENST00000514414 678 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 FO082796.1-201ENST00000523795 183 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC022616.3-201ENST00000523940 148 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 ARL2BPP2-201ENST00000550907 489 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.33□□□□□ -1.72
CDKL5O76039 AL356432.3-201ENST00000568952 465 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 RPS3AP23-202ENST00000574601 686 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 MIR5187-201ENST00000583479 76 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AP001429.1-201ENST00000602568 530 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL5O76039 AC009233.1-201ENST00000616477 371 ntBASIC4.33□□□□□ -1.72
CDKL5O76039 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL5O76039 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL5O76039 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL5O76039 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL5O76039 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL5O76039 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL5O76039 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.32□□□□□ -1.72
CDKL5O76039 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 FRG1BP-201ENST00000278882 761 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDKL5O76039 AC069218.2-201ENST00000411665 344 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 MRPL50P2-201ENST00000416821 482 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC092832.1-201ENST00000422934 400 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 AP1S2P1-201ENST00000457344 379 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 PLGLA-201ENST00000465668 449 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC022034.3-201ENST00000471393 478 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC103987.1-201ENST00000473394 348 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL5O76039 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL5O76039 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.32□□□□□ -1.72
CDKL5O76039 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.32□□□□□ -1.72
CDKL5O76039 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 MIR3160-1-201ENST00000577972 85 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL5O76039 KLKP1-201ENST00000595979 403 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.32□□□□□ -1.72
CDKL5O76039 AC012531.5-201ENST00000611375 151 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC135507.2-201ENST00000612443 309 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 U7.8-201ENST00000619968 63 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC024940.5-201ENST00000622889 474 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AL356585.4-201ENST00000623078 1229 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC009161.2-201ENST00000624626 138 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.32□□□□□ -1.72
CDKL5O76039 AP000553.6-201ENST00000641242 118 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDKL5O76039 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.32□□□□□ -1.72
CDKL5O76039 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 TNPO1P3-201ENST00000436471 2662 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL5O76039 AC006504.1-201ENST00000562493 3666 ntBASIC4.32□□□□□ -1.72
CDKL5O76039 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL5O76039 MTND5P33-201ENST00000571250 1450 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 CKAP2P1-201ENST00000555477 2049 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL5O76039 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL5O76039 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDKL5O76039 Y_RNA.72-201ENST00000362894 103 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RNY4P16-201ENST00000364768 94 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RNU6-169P-201ENST00000365336 107 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 U3.15-201ENST00000365398 212 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 SNORA69-201ENST00000383895 132 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDKL5O76039 RNU6-1158P-201ENST00000391167 107 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RPL32P23-201ENST00000397237 405 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RNA5SP118-201ENST00000410385 109 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms