Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 DUSP12P1-201ENST00000612874 516 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AL138721.1-201ENST00000616756 179 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AC015967.1-201ENST00000619893 476 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40AO75400 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 AL356489.2-201ENST00000566968 3528 ntBASIC5.28□□□□□ -1.56
PRPF40AO75400 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40AO75400 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF40AO75400 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40AO75400 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF40AO75400 Z73965.1-201ENST00000623412 2297 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40AO75400 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PRPF40AO75400 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PRPF40AO75400 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40AO75400 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40AO75400 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PRPF40AO75400 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40AO75400 RNU1-63P-201ENST00000383902 164 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RNU1-44P-201ENST00000384453 163 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RNU6-393P-201ENST00000384475 107 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 MIR548K-201ENST00000408406 116 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RPL37P10-201ENST00000412884 288 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 VN1R36P-201ENST00000414936 291 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 AC092809.3-201ENST00000415453 231 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RPL7P10-201ENST00000417407 739 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40AO75400 ISCUP1-201ENST00000454451 448 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 AC012181.1-201ENST00000479895 423 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 AP001086.1-201ENST00000494882 321 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40AO75400 RN7SKP13-201ENST00000515933 244 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40AO75400 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40AO75400 BDH2P1-201ENST00000602288 736 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC015813.4-201ENST00000610469 179 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC084781.2-201ENST00000615568 161 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 MTND4LP32-201ENST00000636111 270 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF40AO75400 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40AO75400 AC016588.2-201ENST00000632484 3021 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF40AO75400 MTND4P27-201ENST00000450813 1354 ntBASIC5.27□□□□□ -1.57
PRPF40AO75400 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF40AO75400 OR51H2P-202ENST00000641424 3046 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40AO75400 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRPF40AO75400 RNU6-288P-201ENST00000363690 104 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 RNU6-173P-201ENST00000364215 104 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 Y_RNA.579-201ENST00000390939 94 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 RNU6-817P-201ENST00000391083 104 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AL139039.1-201ENST00000401900 692 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 RPL23AP25-201ENST00000430973 463 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AL591704.1-201ENST00000432574 275 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF40AO75400 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40AO75400 RPL23AP89-201ENST00000439324 255 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AURKAPS2-201ENST00000454983 333 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40AO75400 DYNLL1P5-201ENST00000467158 270 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AC106872.2-201ENST00000494303 480 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40AO75400 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40AO75400 TBCAP3-201ENST00000512475 312 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40AO75400 AP004371.1-201ENST00000525240 214 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40AO75400 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40AO75400 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40AO75400 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40AO75400 ATP1B3P1-201ENST00000605365 821 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PRPF40AO75400 MTND5P42-201ENST00000637720 498 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40AO75400 OR52H1-202ENST00000641796 1061 ntBASIC5.26□□□□□ -1.57
PRPF40AO75400 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40AO75400 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40AO75400 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PRPF40AO75400 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PRPF40AO75400 SAMMSON-226ENST00000642089 1582 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF40AO75400 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 RNU6-254P-201ENST00000363377 107 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 RNU6-715P-201ENST00000365204 103 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 Y_RNA.339-201ENST00000365325 102 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 RNA5SP235-201ENST00000365411 114 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 RNU6-434P-201ENST00000384376 107 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 MIR513A2-201ENST00000385249 127 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AC080125.1-201ENST00000414888 684 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms