Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX4O60224 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.27□□□□□ -1.89
SSX4O60224 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX4O60224 AL158071.1-201ENST00000430315 461 ntBASIC3.27□□□□□ -1.89
SSX4O60224 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.27□□□□□ -1.89
SSX4O60224 HMGN2P31-201ENST00000432430 273 ntBASIC3.27□□□□□ -1.89
SSX4O60224 RPL23AP83-201ENST00000434984 473 ntBASIC3.27□□□□□ -1.89
SSX4O60224 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX4O60224 MTCO3P45-201ENST00000443036 613 ntBASIC3.27□□□□□ -1.89
SSX4O60224 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX4O60224 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX4O60224 AL033528.1-201ENST00000453780 140 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC108059.3-201ENST00000456388 214 ntBASIC3.27□□□□□ -1.89
SSX4O60224 SNORD42A-201ENST00000459584 64 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX4O60224 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 AL359273.1-201ENST00000510918 627 ntBASIC3.27□□□□□ -1.89
SSX4O60224 RAC1P2-201ENST00000511164 579 ntBASIC3.27□□□□□ -1.89
SSX4O60224 RN7SKP13-201ENST00000515933 244 ntBASIC3.27□□□□□ -1.89
SSX4O60224 RNU6-840P-201ENST00000517275 65 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.27□□□□□ -1.89
SSX4O60224 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 AP002453.2-201ENST00000533503 320 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX4O60224 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX4O60224 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
SSX4O60224 TGIF1P1-201ENST00000558095 802 ntBASIC3.27□□□□□ -1.89
SSX4O60224 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX4O60224 AC055876.1-202ENST00000567053 138 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC006362.1-201ENST00000567392 174 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AF038458.1-201ENST00000588406 262 ntBASIC3.27□□□□□ -1.89
SSX4O60224 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX4O60224 CKS1BP3-201ENST00000600888 237 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AL137849.1-201ENST00000604767 169 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC012468.1-201ENST00000604888 430 ntBASIC3.27□□□□□ -1.89
SSX4O60224 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX4O60224 AC004696.1-201ENST00000614345 607 ntBASIC3.27□□□□□ -1.89
SSX4O60224 TEX21P-201ENST00000447107 1476 ntBASIC3.27□□□□□ -1.89
SSX4O60224 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 AC007256.1-201ENST00000392253 2765 ntBASIC3.26□□□□□ -1.89
SSX4O60224 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.26□□□□□ -1.89
SSX4O60224 RNY3P13-201ENST00000365542 102 ntBASIC3.26□□□□□ -1.89
SSX4O60224 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX4O60224 AC110754.1-201ENST00000399740 601 ntBASIC3.26□□□□□ -1.89
SSX4O60224 U3.42-201ENST00000408746 214 ntBASIC3.26□□□□□ -1.89
SSX4O60224 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
SSX4O60224 RPL21P24-201ENST00000413752 448 ntBASIC3.26□□□□□ -1.89
SSX4O60224 BTF3L4P1-201ENST00000413813 468 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 MTCO2P34-201ENST00000421994 607 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC018630.2-202ENST00000422992 927 ntBASIC3.26□□□□□ -1.89
SSX4O60224 UBE2D3P2-201ENST00000424409 445 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC008850.1-201ENST00000427546 362 ntBASIC3.26□□□□□ -1.89
SSX4O60224 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX4O60224 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 AC005094.1-201ENST00000440420 368 ntBASIC3.26□□□□□ -1.89
SSX4O60224 MTND6P13-201ENST00000443510 523 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.26□□□□□ -1.89
SSX4O60224 SSXP1-201ENST00000453640 473 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 snoU109.1-201ENST00000459339 135 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC008481.1-201ENST00000463278 396 ntBASIC3.26□□□□□ -1.89
SSX4O60224 MTND1P3-201ENST00000484956 952 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AL049874.1-201ENST00000489560 388 ntBASIC3.26□□□□□ -1.89
SSX4O60224 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 MTND4P2-201ENST00000507767 1203 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX4O60224 AC104619.4-201ENST00000510773 249 ntBASIC3.26□□□□□ -1.89
SSX4O60224 MTCO3P28-201ENST00000513351 515 ntBASIC3.26□□□□□ -1.89
SSX4O60224 GMPSP1-201ENST00000514075 579 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC022447.1-201ENST00000515358 464 ntBASIC3.26□□□□□ -1.89
SSX4O60224 RNU6-64P-201ENST00000517119 105 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC087369.1-201ENST00000520775 996 ntBASIC3.26□□□□□ -1.89
SSX4O60224 FAM60DP-201ENST00000524174 632 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSX4O60224 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 AC123904.3-201ENST00000547218 814 ntBASIC3.26□□□□□ -1.89
SSX4O60224 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX4O60224 AC005951.2-201ENST00000576282 495 ntBASIC3.26□□□□□ -1.89
SSX4O60224 MIR3921-201ENST00000577308 85 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC131902.3-201ENST00000611767 581 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC010678.1-201ENST00000614118 713 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX4O60224 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX4O60224 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX4O60224 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX4O60224 AC092104.1-201ENST00000497346 1441 ntBASIC3.26□□□□□ -1.89
SSX4O60224 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms