Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.43□□□□□ -2.18
CACNA1AO00555 MIR6733-201ENST00000635723 61 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CACNA1AO00555 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CACNA1AO00555 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.42□□□□□ -2.18
CACNA1AO00555 NEK4P1-201ENST00000433383 879 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.42□□□□□ -2.18
CACNA1AO00555 EIF2S2P4-201ENST00000461070 984 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.42□□□□□ -2.18
CACNA1AO00555 Y_RNA.654-201ENST00000497848 106 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 CYCSP23-201ENST00000519781 313 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.42□□□□□ -2.18
CACNA1AO00555 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.42□□□□□ -2.18
CACNA1AO00555 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.42□□□□□ -2.18
CACNA1AO00555 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CACNA1AO00555 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CACNA1AO00555 MIR373-201ENST00000362273 69 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 RNU6-984P-201ENST00000363236 109 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 RNA5SP160-201ENST00000364866 120 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.42□□□□□ -2.18
CACNA1AO00555 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.42□□□□□ -2.18
CACNA1AO00555 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CACNA1AO00555 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.42□□□□□ -2.18
CACNA1AO00555 VN1R79P-201ENST00000593540 513 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 AL160237.3-201ENST00000604114 1013 ntBASIC1.42□□□□□ -2.18
CACNA1AO00555 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.42□□□□□ -2.18
CACNA1AO00555 MTND5P27-201ENST00000428871 1720 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CACNA1AO00555 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CACNA1AO00555 AL512430.2-201ENST00000406786 339 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1AO00555 NDUFB4P5-201ENST00000415445 361 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AC090255.1-201ENST00000495779 349 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1AO00555 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1AO00555 Y_RNA.757-201ENST00000578934 114 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AC007687.1-201ENST00000602704 304 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AL137072.1-201ENST00000603444 466 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 LRRC77P-213ENST00000637727 880 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CACNA1AO00555 AC019155.1-201ENST00000382242 574 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 SNORA18.2-201ENST00000383865 132 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1AO00555 OR9N1P-202ENST00000494289 481 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.41□□□□□ -2.18
CACNA1AO00555 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.41□□□□□ -2.18
CACNA1AO00555 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.41□□□□□ -2.18
CACNA1AO00555 SNORA70.14-201ENST00000516205 110 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1AO00555 AC121758.2-201ENST00000553271 193 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.41□□□□□ -2.18
CACNA1AO00555 TRAV28-201ENST00000557548 323 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 U4.2-201ENST00000618561 85 ntBASIC1.41□□□□□ -2.18
CACNA1AO00555 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.4□□□□□ -2.18
CACNA1AO00555 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.4□□□□□ -2.18
CACNA1AO00555 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.4□□□□□ -2.18
CACNA1AO00555 CLIC4P1-201ENST00000453177 535 ntBASIC1.4□□□□□ -2.18
CACNA1AO00555 HMGN1P28-201ENST00000521340 364 ntBASIC1.4□□□□□ -2.18
CACNA1AO00555 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.4□□□□□ -2.18
CACNA1AO00555 AL845331.3-202ENST00000562856 261 ntBASIC1.4□□□□□ -2.18
CACNA1AO00555 AC016877.3-201ENST00000606778 504 ntBASIC1.4□□□□□ -2.18
CACNA1AO00555 SGO1P2-201ENST00000429458 1589 ntBASIC1.4□□□□□ -2.18
CACNA1AO00555 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CACNA1AO00555 CENPCP1-201ENST00000533085 2578 ntBASIC1.4□□□□□ -2.19
CACNA1AO00555 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.4□□□□□ -2.19
CACNA1AO00555 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.4□□□□□ -2.19
CACNA1AO00555 MTCYBP18-201ENST00000501056 747 ntBASIC1.4□□□□□ -2.19
CACNA1AO00555 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CACNA1AO00555 AC008837.2-201ENST00000513076 418 ntBASIC1.4□□□□□ -2.19
CACNA1AO00555 AC023813.2-201ENST00000564321 469 ntBASIC1.4□□□□□ -2.19
CACNA1AO00555 AC066616.2-201ENST00000559334 1481 ntBASIC1.4□□□□□ -2.19
CACNA1AO00555 AL596028.1-201ENST00000326971 197 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 U3.37-201ENST00000408528 213 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 RPL26P37-201ENST00000411983 438 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1AO00555 Z85994.2-201ENST00000434327 452 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.39□□□□□ -2.19
CACNA1AO00555 RNA5SP67-201ENST00000516422 131 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 MTCYBP19-201ENST00000517463 1124 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AC087808.1-201ENST00000520501 361 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AC006329.2-201ENST00000611491 394 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 uc_338.14-201ENST00000613162 166 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 AC074140.1-201ENST00000621617 208 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 ZNF720P1-201ENST00000562403 1939 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 AC005336.3-201ENST00000623833 2679 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 HMGB1P9-201ENST00000429856 646 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AC004223.1-201ENST00000479840 271 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 RPL21P131-201ENST00000497298 483 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 RN7SKP265-201ENST00000516448 223 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1AO00555 AC138473.1-201ENST00000605717 526 ntBASIC1.39□□□□□ -2.19
CACNA1AO00555 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CACNA1AO00555 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms