Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RPL30P2-201ENST00000414021 291 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.44□□□□□ -1.7
CBX4O00257 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 AL132765.1-201ENST00000434165 553 ntBASIC4.44□□□□□ -1.7
CBX4O00257 RPL26P6-201ENST00000440913 438 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX4O00257 AC020550.1-201ENST00000447385 163 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AL590639.1-201ENST00000456484 337 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.44□□□□□ -1.7
CBX4O00257 SNORA84-201ENST00000459229 133 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC110792.1-201ENST00000491826 472 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 AC117522.3-201ENST00000507974 584 ntBASIC4.44□□□□□ -1.7
CBX4O00257 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 RNA5SP360-201ENST00000516555 118 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.44□□□□□ -1.7
CBX4O00257 AC107953.1-201ENST00000522216 297 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX4O00257 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX4O00257 PSMA3P-201ENST00000555485 635 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC005668.1-201ENST00000571142 476 ntBASIC4.44□□□□□ -1.7
CBX4O00257 MIR4424-201ENST00000585257 86 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.44□□□□□ -1.7
CBX4O00257 AL158032.1-201ENST00000605401 106 ntBASIC4.44□□□□□ -1.7
CBX4O00257 uc_338.5-201ENST00000611839 155 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AL365204.3-201ENST00000612448 685 ntBASIC4.44□□□□□ -1.7
CBX4O00257 AC140113.4-201ENST00000622087 222 ntBASIC4.44□□□□□ -1.7
CBX4O00257 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX4O00257 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX4O00257 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX4O00257 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX4O00257 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX4O00257 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX4O00257 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX4O00257 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CBX4O00257 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CBX4O00257 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CBX4O00257 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX4O00257 AL158163.1-201ENST00000603915 1649 ntBASIC4.43□□□□□ -1.7
CBX4O00257 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CBX4O00257 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CBX4O00257 RNU1-94P-201ENST00000362627 173 ntBASIC4.43□□□□□ -1.7
CBX4O00257 RNU5A-1-201ENST00000362698 116 ntBASIC4.43□□□□□ -1.7
CBX4O00257 RNU1-64P-201ENST00000365443 163 ntBASIC4.43□□□□□ -1.7
CBX4O00257 Y_RNA.529-201ENST00000384586 119 ntBASIC4.43□□□□□ -1.7
CBX4O00257 MIR195-201ENST00000385194 87 ntBASIC4.43□□□□□ -1.7
CBX4O00257 RNU6-550P-201ENST00000391057 101 ntBASIC4.43□□□□□ -1.7
CBX4O00257 PDCL2P1-201ENST00000419302 352 ntBASIC4.43□□□□□ -1.7
CBX4O00257 KCTD9P3-201ENST00000434597 1169 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC092001.1-201ENST00000453012 261 ntBASIC4.43□□□□□ -1.7
CBX4O00257 RNU6-953P-201ENST00000459154 107 ntBASIC4.43□□□□□ -1.7
CBX4O00257 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.43□□□□□ -1.7
CBX4O00257 AC108860.1-201ENST00000484521 383 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC106872.2-201ENST00000494303 480 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC098591.2-201ENST00000510152 315 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX4O00257 RNU6-685P-201ENST00000517088 95 ntBASIC4.43□□□□□ -1.7
CBX4O00257 RN7SKP258-201ENST00000517151 304 ntBASIC4.43□□□□□ -1.7
CBX4O00257 NARSP2-201ENST00000518524 679 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.43□□□□□ -1.7
CBX4O00257 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX4O00257 TRAV8-5-201ENST00000537369 341 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AL352979.3-201ENST00000553515 247 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AL355836.1-201ENST00000555951 870 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.43□□□□□ -1.7
CBX4O00257 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX4O00257 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.43□□□□□ -1.7
CBX4O00257 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CBX4O00257 AC008521.1-201ENST00000587471 187 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AL354984.3-201ENST00000604803 325 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AL591034.3-201ENST00000605511 685 ntBASIC4.43□□□□□ -1.7
CBX4O00257 SNX18P1Y-201ENST00000616231 511 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC009233.1-201ENST00000616477 371 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AL357559.1-201ENST00000622228 274 ntBASIC4.43□□□□□ -1.7
CBX4O00257 AC008785.1-201ENST00000624475 456 ntBASIC4.43□□□□□ -1.7
CBX4O00257 RNA5SP196-201ENST00000625967 102 ntBASIC4.43□□□□□ -1.7
CBX4O00257 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.43□□□□□ -1.7
CBX4O00257 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CBX4O00257 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CBX4O00257 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX4O00257 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CBX4O00257 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX4O00257 AP004289.2-201ENST00000444413 1457 ntBASIC4.43□□□□□ -1.7
CBX4O00257 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CBX4O00257 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CBX4O00257 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.42□□□□□ -1.7
CBX4O00257 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CBX4O00257 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CBX4O00257 RNU1-132P-201ENST00000364300 164 ntBASIC4.42□□□□□ -1.7
CBX4O00257 Y_RNA.373-201ENST00000365600 103 ntBASIC4.42□□□□□ -1.7
CBX4O00257 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CBX4O00257 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CBX4O00257 UBE2V1P2-201ENST00000397758 440 ntBASIC4.42□□□□□ -1.7
CBX4O00257 AL356432.1-201ENST00000405809 419 ntBASIC4.42□□□□□ -1.7
CBX4O00257 RNA5SP317-201ENST00000410176 116 ntBASIC4.42□□□□□ -1.7
CBX4O00257 MIR1911-201ENST00000410783 80 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms