Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 SPRR2C-201ENST00000290702 219 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 Y_RNA.303-201ENST00000364998 94 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-14P-201ENST00000384630 106 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-903P-201ENST00000391270 109 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP118-201ENST00000410385 109 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-628P-201ENST00000410675 107 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AL161631.1-201ENST00000417933 486 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 COX6B1P7-201ENST00000430845 235 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 MTND3P10-201ENST00000450967 341 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 SNRPFP3-201ENST00000457792 225 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RPL21P104-201ENST00000464143 478 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RPL31P60-201ENST00000478450 367 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC018710.1-201ENST00000506509 158 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RANP9-201ENST00000519957 271 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AF235103.2-201ENST00000525753 346 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC015917.1-201ENST00000579654 510 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 SLC25A36P1-201ENST00000590111 465 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AL670379.4-201ENST00000605279 254 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AL359547.2-201ENST00000615810 418 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 SNX18P1Y-201ENST00000616231 511 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 AC079684.1-201ENST00000621405 437 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 DUXAP9-208ENST00000622815 614 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 OR4G1P-203ENST00000641984 1631 ntBASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MBD3L4A6NDZ8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC018529.3-201ENST00000624212 2254 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC139713.2-215ENST00000641428 5037 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RNU1-20P-201ENST00000363314 162 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 Y_RNA.160-201ENST00000363677 92 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-867P-201ENST00000364956 107 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-116P-201ENST00000384042 109 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 MT-TL1-201ENST00000386347 75 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-550P-201ENST00000391057 101 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RPL7P46-201ENST00000425129 740 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC091390.3-201ENST00000426478 338 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 CALM2P2-201ENST00000428512 440 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AL591212.2-201ENST00000433923 257 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 ELOCP23-201ENST00000452014 332 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RPL21P8-201ENST00000465083 535 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC034236.1-201ENST00000469891 373 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC117522.3-201ENST00000507974 584 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 FTH1P9-201ENST00000513251 355 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 SNORA31.3-201ENST00000516029 96 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-927P-201ENST00000516199 100 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC090151.1-201ENST00000520784 730 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AP005205.1-201ENST00000563503 508 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC006130.2-201ENST00000586202 326 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC008521.1-201ENST00000587471 187 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AC174048.1-201ENST00000603389 144 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 AL035413.2-201ENST00000604801 525 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 MTND5P42-201ENST00000637720 498 ntBASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
MBD3L4A6NDZ8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms