Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RNA5SP234-201ENST00000363916 119 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.461-201ENST00000384263 103 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 SNORA66-201ENST00000384792 133 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AP000580.1-201ENST00000404439 358 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RNU4-34P-201ENST00000410431 124 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AL513331.1-201ENST00000411908 397 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 CYCSP33-201ENST00000414485 327 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RPL21P2-201ENST00000440049 481 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AL450023.3-201ENST00000440592 271 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RPL26P6-201ENST00000440913 438 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AL391987.1-201ENST00000441025 200 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AL161636.2-201ENST00000445179 927 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 OR1H1P-201ENST00000448731 937 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RPL23AP2-201ENST00000471227 466 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC108860.1-201ENST00000484521 383 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC083829.1-201ENST00000503756 657 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 VN1R104P-201ENST00000505115 1009 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 APOOP4-201ENST00000513530 597 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RN7SKP46-201ENST00000515942 234 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AP000889.1-201ENST00000530968 660 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 OR5D17P-201ENST00000531492 978 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RPL10P14-201ENST00000565265 298 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 RN7SL753P-201ENST00000581238 290 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 MIR4273-201ENST00000582824 84 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC125232.2-201ENST00000592457 143 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC107294.1-201ENST00000609524 467 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 U6.104-201ENST00000637979 90 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC022893.2-201ENST00000564832 3296 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 AC009812.4-201ENST00000569134 1805 ntBASIC4.42□□□□□ -1.7
SHISA3A0PJX4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AL592437.2-201ENST00000421655 2434 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC083843.2-201ENST00000568248 6253 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 RNY1P16-201ENST00000363063 111 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.324-201ENST00000365165 102 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.350-201ENST00000365409 98 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 RNU6-933P-201ENST00000384424 107 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.551-201ENST00000384661 102 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 MIR625-201ENST00000385047 85 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 RN7SKP206-201ENST00000410823 293 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 OR2AT2P-201ENST00000413438 905 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 EIF4HP2-201ENST00000424380 563 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 BX323845.1-201ENST00000432417 179 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AL353997.1-201ENST00000432936 108 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC133473.1-201ENST00000455173 299 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 RN7SL174P-201ENST00000475578 289 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC113155.1-201ENST00000511141 769 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 RNU6-1315P-201ENST00000517187 99 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 IGHV3-76-201ENST00000522465 295 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 CBX3P8-201ENST00000532412 525 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AL121603.1-201ENST00000553815 142 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 VN1R91P-201ENST00000594377 169 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AL109918.3-201ENST00000603072 338 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 HMGB1P50-201ENST00000605814 607 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 RPSAP73-201ENST00000614820 330 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC015967.1-201ENST00000619893 476 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 SNORD39.4-201ENST00000620099 78 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC233263.6-201ENST00000631132 1963 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms