Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 LINC00565-201ENST00000562710 2331 ntBASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 TSPY22P-201ENST00000427496 604 ntBASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 MIR3180-5-201ENST00000583743 153 ntBASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 AC104692.2-201ENST00000603054 253 ntBASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 AL157888.1-201ENST00000631930 593 ntBASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RTCBQ9Y3I0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 MIR662-201ENST00000384847 95 ntBASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 AL136038.4-201ENST00000603606 1261 ntBASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 AL121772.3-201ENST00000610840 674 ntBASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTCBQ9Y3I0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 DRAXINP1-201ENST00000437611 948 ntBASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 MCCD1P1-208ENST00000445732 328 ntBASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 AL160237.2-201ENST00000556165 472 ntBASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 TPSP2-201ENST00000561760 610 ntBASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 AC091304.2-201ENST00000564639 760 ntBASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTCBQ9Y3I0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 AL512408.1-201ENST00000569378 2000 ntBASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 ZNF815P-204ENST00000434898 1737 ntBASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 AP000867.3-201ENST00000524675 377 ntBASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 GPALPP1-207ENST00000611650 899 ntBASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
RTCBQ9Y3I0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms