Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 REXO1L10P-201ENST00000615707 1290 ntBASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 AC133561.5-201ENST00000635547 218 ntBASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPH3AQ9Y2J0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPH3AQ9Y2J0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPH3AQ9Y2J0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPH3AQ9Y2J0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.52■□□□□ 0.39
RPH3AQ9Y2J0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPH3AQ9Y2J0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPH3AQ9Y2J0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 ZNF815P-204ENST00000434898 1737 ntBASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 MIR6786-201ENST00000616843 113 ntBASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AC097493.4-201ENST00000641197 219 ntBASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AC120498.9-201ENST00000339021 3867 ntBASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPH3AQ9Y2J0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AC011506.1-201ENST00000474329 610 ntBASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AC026271.3-201ENST00000571884 352 ntBASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AC012306.2-201ENST00000609350 630 ntBASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 FSCN1P1-201ENST00000568912 1481 ntBASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 RCC2P6-201ENST00000526625 1557 ntBASIC17.49■□□□□ 0.39
RPH3AQ9Y2J0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms