Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 MIR3652-201ENST00000579335 131 ntBASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 AC092329.2-201ENST00000598402 547 ntBASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 AC036111.1-201ENST00000533973 1582 ntBASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CDK11AQ9UQ88 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC29.51■■■□□ 2.32
CDK11AQ9UQ88 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CDK11AQ9UQ88 SDHAP1-207ENST00000440850 2000 ntBASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 TSSC2-201ENST00000450217 709 ntBASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 MIR3180-5-201ENST00000583743 153 ntBASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 AL121672.3-201ENST00000608644 468 ntBASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC29.51■■■□□ 2.31
CDK11AQ9UQ88 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 AC099778.1-201ENST00000568593 1911 ntBASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 IRF5-214ENST00000613821 595 ntTSL 5 BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDK11AQ9UQ88 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 GRAMD4P1-201ENST00000435181 1110 ntBASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 BX276092.5-203ENST00000456199 560 ntBASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 AC007375.3-201ENST00000600936 2314 ntBASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDK11AQ9UQ88 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 GAS2L1P1-201ENST00000420145 1480 ntBASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 PKD1P6-201ENST00000343738 4769 ntBASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 MCCD1P1-208ENST00000445732 328 ntBASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 SDHD-206ENST00000528182 754 ntTSL 3 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 AC016734.2-201ENST00000624325 1377 ntBASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDK11AQ9UQ88 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 KRT8P3-201ENST00000519669 1449 ntBASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 SEC1P-202ENST00000473944 940 ntBASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 PRELID1P1-202ENST00000567272 903 ntBASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDK11AQ9UQ88 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms