Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 AC026271.3-201ENST00000571884 352 ntBASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 EGLN1P1-201ENST00000531623 762 ntBASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 WWOX-216ENST00000569818 525 ntBASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 PTBP1P-201ENST00000554374 1601 ntBASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 AL158211.5-201ENST00000623583 2518 ntBASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
POLR1BQ9H9Y6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 TCF3P1-201ENST00000423021 1937 ntBASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 AP005242.2-201ENST00000580065 1175 ntBASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.87■□□□□ 0.61
POLR1BQ9H9Y6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 DGCR10-201ENST00000609839 495 ntBASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 AL445675.2-201ENST00000620291 557 ntBASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 FP700111.2-201ENST00000619190 1892 ntBASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR1BQ9H9Y6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 TSPY14P-201ENST00000303979 915 ntBASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 AC128688.1-201ENST00000487626 519 ntBASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 C1QL1P1-201ENST00000568105 661 ntBASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 AC006011.2-201ENST00000621313 1158 ntBASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms