Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.33■□□□□ 0.85
CDH23Q9H251 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CDH23Q9H251 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH23Q9H251 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.33■□□□□ 0.85
CDH23Q9H251 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
CDH23Q9H251 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.33■□□□□ 0.85
CDH23Q9H251 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.33■□□□□ 0.85
CDH23Q9H251 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.33■□□□□ 0.85
CDH23Q9H251 AC093525.10-201ENST00000625130 1569 ntBASIC20.33■□□□□ 0.85
CDH23Q9H251 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH23Q9H251 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.33■□□□□ 0.85
CDH23Q9H251 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH23Q9H251 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH23Q9H251 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.33■□□□□ 0.84
CDH23Q9H251 AC079602.3-201ENST00000623931 403 ntBASIC20.33■□□□□ 0.84
CDH23Q9H251 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
CDH23Q9H251 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH23Q9H251 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH23Q9H251 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 SEC1P-202ENST00000473944 940 ntBASIC20.32■□□□□ 0.84
CDH23Q9H251 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 AC121338.2-201ENST00000622535 1744 ntBASIC20.32■□□□□ 0.84
CDH23Q9H251 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 AC106730.1-201ENST00000566722 1090 ntBASIC20.32■□□□□ 0.84
CDH23Q9H251 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH23Q9H251 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH23Q9H251 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CDH23Q9H251 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH23Q9H251 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH23Q9H251 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH23Q9H251 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH23Q9H251 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH23Q9H251 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDH23Q9H251 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH23Q9H251 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH23Q9H251 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.31■□□□□ 0.84
CDH23Q9H251 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH23Q9H251 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH23Q9H251 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.31■□□□□ 0.84
CDH23Q9H251 MIR662-201ENST00000384847 95 ntBASIC20.31■□□□□ 0.84
CDH23Q9H251 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.31■□□□□ 0.84
CDH23Q9H251 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH23Q9H251 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH23Q9H251 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH23Q9H251 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH23Q9H251 AC112907.3-201ENST00000577781 2400 ntBASIC20.31■□□□□ 0.84
CDH23Q9H251 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDH23Q9H251 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH23Q9H251 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CDH23Q9H251 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH23Q9H251 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 AC024243.1-201ENST00000609234 778 ntBASIC20.3■□□□□ 0.84
CDH23Q9H251 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH23Q9H251 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.3■□□□□ 0.84
CDH23Q9H251 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH23Q9H251 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms