Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Rab3c-203ENSMUST00000224180 967 ntBASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube4bQ9ES00 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube4bQ9ES00 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube4bQ9ES00 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube4bQ9ES00 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube4bQ9ES00 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Sybu-209ENSMUST00000228639 4113 ntBASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Gm38285-201ENSMUST00000192928 922 ntBASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ube4bQ9ES00 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.68■□□□□ 0.1
Ube4bQ9ES00 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ube4bQ9ES00 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4bQ9ES00 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms