Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 GPX1P2-201ENST00000429271 606 ntBASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 AF238378.1-201ENST00000526806 358 ntBASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.21■□□□□ 0.51
CNTNAP3Q9BZ76 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CNTNAP3Q9BZ76 AL121603.2-201ENST00000557373 2117 ntBASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 CYMP-203ENST00000474680 1263 ntBASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3Q9BZ76 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 TSPY22P-201ENST00000427496 604 ntBASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 AL162741.1-201ENST00000565563 1558 ntBASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3Q9BZ76 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 AC093525.10-201ENST00000625130 1569 ntBASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 AC009065.1-201ENST00000564055 1225 ntBASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 AC074051.2-201ENST00000565115 352 ntBASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 REXO1L6P-202ENST00000619970 1078 ntBASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 AC134684.3-201ENST00000641758 218 ntBASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms