Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfwd3Q8CIK8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.33■□□□□ 0.05
Rfwd3Q8CIK8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Gm6345-202ENSMUST00000180900 204 ntBASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfwd3Q8CIK8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfwd3Q8CIK8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Mir770-201ENSMUST00000103252 94 ntBASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd3Q8CIK8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.3■□□□□ 0.04
Rfwd3Q8CIK8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms