Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.47■□□□□ 0.39
ATRXP46100 Z98882.1-201ENST00000622160 2253 ntBASIC17.47■□□□□ 0.39
ATRXP46100 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATRXP46100 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.47■□□□□ 0.39
ATRXP46100 TMEM179-206ENST00000616017 1645 ntBASIC17.47■□□□□ 0.39
ATRXP46100 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.46■□□□□ 0.39
ATRXP46100 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 GK-202ENST00000378941 458 ntTSL 3 BASIC17.46■□□□□ 0.39
ATRXP46100 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.46■□□□□ 0.39
ATRXP46100 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.46■□□□□ 0.39
ATRXP46100 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 ZNF259P1-201ENST00000407656 1365 ntBASIC17.46■□□□□ 0.39
ATRXP46100 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 AKR1C7P-201ENST00000305623 895 ntBASIC17.46■□□□□ 0.39
ATRXP46100 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.46■□□□□ 0.39
ATRXP46100 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.46■□□□□ 0.39
ATRXP46100 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.46■□□□□ 0.39
ATRXP46100 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.46■□□□□ 0.39
ATRXP46100 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
ATRXP46100 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.46■□□□□ 0.39
ATRXP46100 AC148477.8-201ENST00000624298 468 ntBASIC17.46■□□□□ 0.39
ATRXP46100 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATRXP46100 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 DPP3P2-201ENST00000416030 1696 ntBASIC17.46■□□□□ 0.39
ATRXP46100 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 AF106564.1-201ENST00000607058 2553 ntBASIC17.46■□□□□ 0.39
ATRXP46100 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATRXP46100 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATRXP46100 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.46■□□□□ 0.38
ATRXP46100 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ATRXP46100 SCARNA2-201ENST00000458748 420 ntBASIC17.45■□□□□ 0.38
ATRXP46100 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATRXP46100 AL356488.2-201ENST00000602755 427 ntBASIC17.45■□□□□ 0.38
ATRXP46100 AF228730.6-201ENST00000641497 218 ntBASIC17.45■□□□□ 0.38
ATRXP46100 AC084121.3-201ENST00000641716 218 ntBASIC17.45■□□□□ 0.38
ATRXP46100 AC105233.6-201ENST00000642093 218 ntBASIC17.45■□□□□ 0.38
ATRXP46100 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATRXP46100 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATRXP46100 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATRXP46100 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATRXP46100 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 AC063926.2-201ENST00000623766 1308 ntBASIC17.45■□□□□ 0.38
ATRXP46100 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 AP006288.1-201ENST00000446065 395 ntBASIC17.45■□□□□ 0.38
ATRXP46100 LINC00265-3P-201ENST00000447588 903 ntBASIC17.45■□□□□ 0.38
ATRXP46100 AL096865.1-201ENST00000606796 927 ntBASIC17.45■□□□□ 0.38
ATRXP46100 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.45■□□□□ 0.38
ATRXP46100 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.45■□□□□ 0.38
ATRXP46100 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATRXP46100 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.45■□□□□ 0.38
ATRXP46100 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.45■□□□□ 0.38
ATRXP46100 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATRXP46100 PHGDH-210ENST00000641115 1638 ntBASIC17.45■□□□□ 0.38
ATRXP46100 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATRXP46100 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.44■□□□□ 0.38
ATRXP46100 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.44■□□□□ 0.38
ATRXP46100 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.44■□□□□ 0.38
ATRXP46100 RPS2P1-201ENST00000434010 821 ntBASIC17.44■□□□□ 0.38
ATRXP46100 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 SMG8-203ENST00000578922 2178 ntBASIC17.44■□□□□ 0.38
ATRXP46100 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATRXP46100 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATRXP46100 FP700111.2-201ENST00000619190 1892 ntBASIC17.44■□□□□ 0.38
ATRXP46100 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 MIR662-201ENST00000384847 95 ntBASIC17.44■□□□□ 0.38
ATRXP46100 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.44■□□□□ 0.38
ATRXP46100 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.44■□□□□ 0.38
ATRXP46100 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.44■□□□□ 0.38
ATRXP46100 AL160286.2-201ENST00000567150 934 ntBASIC17.44■□□□□ 0.38
ATRXP46100 AL596442.2-201ENST00000610240 980 ntBASIC17.44■□□□□ 0.38
ATRXP46100 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.44■□□□□ 0.38
ATRXP46100 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.44■□□□□ 0.38
ATRXP46100 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATRXP46100 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATRXP46100 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.44■□□□□ 0.38
ATRXP46100 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms