Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 IL9RP2-201ENST00000423948 1312 ntBASIC23.47■■□□□ 1.35
KCNA3P22001 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNA3P22001 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
KCNA3P22001 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.46■■□□□ 1.35
KCNA3P22001 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
KCNA3P22001 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
KCNA3P22001 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
KCNA3P22001 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNA3P22001 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.46■■□□□ 1.35
KCNA3P22001 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 SLC25A1P1-201ENST00000528351 927 ntBASIC23.46■■□□□ 1.35
KCNA3P22001 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.46■■□□□ 1.35
KCNA3P22001 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNA3P22001 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNA3P22001 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.46■■□□□ 1.35
KCNA3P22001 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNA3P22001 EP400NL-214ENST00000641289 2402 ntBASIC23.46■■□□□ 1.35
KCNA3P22001 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
KCNA3P22001 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
KCNA3P22001 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
KCNA3P22001 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
KCNA3P22001 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
KCNA3P22001 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
KCNA3P22001 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
KCNA3P22001 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KCNA3P22001 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.45■■□□□ 1.34
KCNA3P22001 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.45■■□□□ 1.34
KCNA3P22001 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.45■■□□□ 1.34
KCNA3P22001 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.45■■□□□ 1.34
KCNA3P22001 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
KCNA3P22001 AC074051.2-201ENST00000565115 352 ntBASIC23.45■■□□□ 1.34
KCNA3P22001 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KCNA3P22001 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.45■■□□□ 1.34
KCNA3P22001 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
KCNA3P22001 Z83836.1-201ENST00000624605 1642 ntBASIC23.44■■□□□ 1.34
KCNA3P22001 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KCNA3P22001 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KCNA3P22001 AC233702.3-201ENST00000578656 1387 ntBASIC23.44■■□□□ 1.34
KCNA3P22001 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
KCNA3P22001 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KCNA3P22001 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.44■■□□□ 1.34
KCNA3P22001 IGHV3-47-201ENST00000425060 335 ntBASIC23.44■■□□□ 1.34
KCNA3P22001 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.44■■□□□ 1.34
KCNA3P22001 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.44■■□□□ 1.34
KCNA3P22001 AF238378.1-201ENST00000526806 358 ntBASIC23.44■■□□□ 1.34
KCNA3P22001 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.44■■□□□ 1.34
KCNA3P22001 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.44■■□□□ 1.34
KCNA3P22001 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.44■■□□□ 1.34
KCNA3P22001 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KCNA3P22001 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.44■■□□□ 1.34
KCNA3P22001 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
KCNA3P22001 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.44■■□□□ 1.34
KCNA3P22001 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.43■■□□□ 1.34
KCNA3P22001 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
KCNA3P22001 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.43■■□□□ 1.34
KCNA3P22001 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.43■■□□□ 1.34
KCNA3P22001 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
KCNA3P22001 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.43■■□□□ 1.34
KCNA3P22001 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.43■■□□□ 1.34
KCNA3P22001 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.43■■□□□ 1.34
KCNA3P22001 TP73-AS1-207ENST00000624167 988 ntBASIC23.43■■□□□ 1.34
KCNA3P22001 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
KCNA3P22001 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNA3P22001 LINC00167-201ENST00000530583 1419 ntBASIC23.42■■□□□ 1.34
KCNA3P22001 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.42■■□□□ 1.34
KCNA3P22001 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.42■■□□□ 1.34
KCNA3P22001 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
KCNA3P22001 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.42■■□□□ 1.34
KCNA3P22001 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.42■■□□□ 1.34
KCNA3P22001 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.42■■□□□ 1.34
KCNA3P22001 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
KCNA3P22001 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms