Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF13O43567 KRT18P16-201ENST00000510337 1294 ntBASIC17.4■□□□□ 0.38
RNF13O43567 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF13O43567 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF13O43567 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 AC008403.3-201ENST00000598924 454 ntBASIC17.4■□□□□ 0.38
RNF13O43567 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF13O43567 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF13O43567 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF13O43567 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF13O43567 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF13O43567 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.39■□□□□ 0.37
RNF13O43567 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RNF13O43567 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF13O43567 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF13O43567 AC026366.1-201ENST00000488803 879 ntBASIC17.39■□□□□ 0.37
RNF13O43567 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RNF13O43567 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF13O43567 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF13O43567 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF13O43567 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF13O43567 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF13O43567 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF13O43567 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF13O43567 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 AC007613.1-201ENST00000572811 2597 ntBASIC17.38■□□□□ 0.37
RNF13O43567 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF13O43567 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RNF13O43567 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF13O43567 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RNF13O43567 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
RNF13O43567 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF13O43567 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF13O43567 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF13O43567 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF13O43567 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF13O43567 BCL2-203ENST00000589955 5011 ntBASIC17.38■□□□□ 0.37
RNF13O43567 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF13O43567 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF13O43567 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF13O43567 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF13O43567 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF13O43567 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF13O43567 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF13O43567 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF13O43567 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF13O43567 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms