Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm3839S4R1W1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm3839S4R1W1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3839S4R1W1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3839S4R1W1 Gm11599-201ENSMUST00000118720 878 ntBASIC20.75■□□□□ 0.91
Gm3839S4R1W1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3839S4R1W1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm3839S4R1W1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3839S4R1W1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3839S4R1W1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3839S4R1W1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm3839S4R1W1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Gm3839S4R1W1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm3839S4R1W1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3839S4R1W1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.69■□□□□ 0.9
Gm3839S4R1W1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm3839S4R1W1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm3839S4R1W1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm3839S4R1W1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3839S4R1W1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3839S4R1W1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.68■□□□□ 0.9
Gm3839S4R1W1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm3839S4R1W1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm3839S4R1W1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3839S4R1W1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3839S4R1W1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3839S4R1W1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3839S4R1W1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3839S4R1W1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3839S4R1W1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3839S4R1W1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3839S4R1W1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.65■□□□□ 0.9
Gm3839S4R1W1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Gm3839S4R1W1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3839S4R1W1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3839S4R1W1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3839S4R1W1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.64■□□□□ 0.89
Gm3839S4R1W1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3839S4R1W1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3839S4R1W1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3839S4R1W1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3839S4R1W1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3839S4R1W1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3839S4R1W1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3839S4R1W1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm3839S4R1W1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3839S4R1W1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm3839S4R1W1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3839S4R1W1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3839S4R1W1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3839S4R1W1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3839S4R1W1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3839S4R1W1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3839S4R1W1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3839S4R1W1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Gm3839S4R1W1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm3839S4R1W1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3839S4R1W1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3839S4R1W1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3839S4R1W1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3839S4R1W1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3839S4R1W1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3839S4R1W1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3839S4R1W1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3839S4R1W1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.54■□□□□ 0.88
Gm3839S4R1W1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3839S4R1W1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3839S4R1W1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm3839S4R1W1 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.53■□□□□ 0.88
Gm3839S4R1W1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.52■□□□□ 0.88
Gm3839S4R1W1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3839S4R1W1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3839S4R1W1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3839S4R1W1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm3839S4R1W1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm3839S4R1W1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm3839S4R1W1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3839S4R1W1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Gm3839S4R1W1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3839S4R1W1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.48■□□□□ 0.87
Gm3839S4R1W1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms