Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rhox4bQ9JI43 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rhox4bQ9JI43 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhox4bQ9JI43 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rhox4bQ9JI43 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhox4bQ9JI43 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhox4bQ9JI43 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rhox4bQ9JI43 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rhox4bQ9JI43 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rhox4bQ9JI43 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.58■□□□□ 0.57
Rhox4bQ9JI43 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rhox4bQ9JI43 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rhox4bQ9JI43 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rhox4bQ9JI43 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rhox4bQ9JI43 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rhox4bQ9JI43 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rhox4bQ9JI43 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rhox4bQ9JI43 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rhox4bQ9JI43 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rhox4bQ9JI43 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rhox4bQ9JI43 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.56■□□□□ 0.56
Rhox4bQ9JI43 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rhox4bQ9JI43 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rhox4bQ9JI43 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4bQ9JI43 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4bQ9JI43 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4bQ9JI43 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4bQ9JI43 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4bQ9JI43 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rhox4bQ9JI43 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rhox4bQ9JI43 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rhox4bQ9JI43 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4bQ9JI43 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4bQ9JI43 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4bQ9JI43 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4bQ9JI43 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4bQ9JI43 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4bQ9JI43 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4bQ9JI43 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4bQ9JI43 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhox4bQ9JI43 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rhox4bQ9JI43 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhox4bQ9JI43 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rhox4bQ9JI43 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4bQ9JI43 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.47■□□□□ 0.55
Rhox4bQ9JI43 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rhox4bQ9JI43 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rhox4bQ9JI43 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rhox4bQ9JI43 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4bQ9JI43 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4bQ9JI43 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rhox4bQ9JI43 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4bQ9JI43 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4bQ9JI43 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4bQ9JI43 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4bQ9JI43 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rhox4bQ9JI43 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4bQ9JI43 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4bQ9JI43 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.42■□□□□ 0.54
Rhox4bQ9JI43 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4bQ9JI43 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4bQ9JI43 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4bQ9JI43 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4bQ9JI43 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4bQ9JI43 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms