Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndel1Q9ERR1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndel1Q9ERR1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.44■■□□□ 1.02
Ndel1Q9ERR1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndel1Q9ERR1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndel1Q9ERR1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ndel1Q9ERR1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndel1Q9ERR1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ndel1Q9ERR1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ndel1Q9ERR1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ndel1Q9ERR1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndel1Q9ERR1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ndel1Q9ERR1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 Gm45855-201ENSMUST00000212546 880 ntBASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ndel1Q9ERR1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ndel1Q9ERR1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndel1Q9ERR1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndel1Q9ERR1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndel1Q9ERR1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ndel1Q9ERR1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ndel1Q9ERR1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Ndel1Q9ERR1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ndel1Q9ERR1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndel1Q9ERR1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ndel1Q9ERR1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndel1Q9ERR1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndel1Q9ERR1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndel1Q9ERR1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ndel1Q9ERR1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndel1Q9ERR1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndel1Q9ERR1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ndel1Q9ERR1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ndel1Q9ERR1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ndel1Q9ERR1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndel1Q9ERR1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ndel1Q9ERR1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.32■■□□□ 1
Ndel1Q9ERR1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Ndel1Q9ERR1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ndel1Q9ERR1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ndel1Q9ERR1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Ndel1Q9ERR1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ndel1Q9ERR1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndel1Q9ERR1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndel1Q9ERR1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ndel1Q9ERR1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndel1Q9ERR1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ndel1Q9ERR1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ndel1Q9ERR1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndel1Q9ERR1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndel1Q9ERR1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndel1Q9ERR1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Ndel1Q9ERR1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Ndel1Q9ERR1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.27■■□□□ 1
Ndel1Q9ERR1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Ndel1Q9ERR1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ndel1Q9ERR1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndel1Q9ERR1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.26■□□□□ 0.99
Ndel1Q9ERR1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndel1Q9ERR1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndel1Q9ERR1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndel1Q9ERR1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndel1Q9ERR1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndel1Q9ERR1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndel1Q9ERR1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.24■□□□□ 0.99
Ndel1Q9ERR1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.24■□□□□ 0.99
Ndel1Q9ERR1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ndel1Q9ERR1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndel1Q9ERR1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndel1Q9ERR1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndel1Q9ERR1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndel1Q9ERR1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndel1Q9ERR1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms