Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.43■□□□□ 0.86
Tmem54Q9D7S1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem54Q9D7S1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.42■□□□□ 0.86
Tmem54Q9D7S1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem54Q9D7S1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tmem54Q9D7S1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.42■□□□□ 0.86
Tmem54Q9D7S1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.41■□□□□ 0.86
Tmem54Q9D7S1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem54Q9D7S1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem54Q9D7S1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem54Q9D7S1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem54Q9D7S1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem54Q9D7S1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmem54Q9D7S1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Tmem54Q9D7S1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem54Q9D7S1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tmem54Q9D7S1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem54Q9D7S1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem54Q9D7S1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Tmem54Q9D7S1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.36■□□□□ 0.85
Tmem54Q9D7S1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem54Q9D7S1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem54Q9D7S1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tmem54Q9D7S1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem54Q9D7S1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem54Q9D7S1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem54Q9D7S1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.35■□□□□ 0.85
Tmem54Q9D7S1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem54Q9D7S1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem54Q9D7S1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Tmem54Q9D7S1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem54Q9D7S1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem54Q9D7S1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Tmem54Q9D7S1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tmem54Q9D7S1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem54Q9D7S1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem54Q9D7S1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem54Q9D7S1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem54Q9D7S1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem54Q9D7S1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem54Q9D7S1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem54Q9D7S1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tmem54Q9D7S1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem54Q9D7S1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tmem54Q9D7S1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem54Q9D7S1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem54Q9D7S1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Tmem54Q9D7S1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem54Q9D7S1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem54Q9D7S1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.29■□□□□ 0.84
Tmem54Q9D7S1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tmem54Q9D7S1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.29■□□□□ 0.84
Tmem54Q9D7S1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem54Q9D7S1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.28■□□□□ 0.84
Tmem54Q9D7S1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem54Q9D7S1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem54Q9D7S1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tmem54Q9D7S1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem54Q9D7S1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tmem54Q9D7S1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Tmem54Q9D7S1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmem54Q9D7S1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tmem54Q9D7S1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmem54Q9D7S1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmem54Q9D7S1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.26■□□□□ 0.83
Tmem54Q9D7S1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmem54Q9D7S1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tmem54Q9D7S1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem54Q9D7S1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem54Q9D7S1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem54Q9D7S1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.24■□□□□ 0.83
Tmem54Q9D7S1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tmem54Q9D7S1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.24■□□□□ 0.83
Tmem54Q9D7S1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem54Q9D7S1 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.22■□□□□ 0.83
Tmem54Q9D7S1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tmem54Q9D7S1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem54Q9D7S1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem54Q9D7S1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem54Q9D7S1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem54Q9D7S1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem54Q9D7S1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem54Q9D7S1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.2■□□□□ 0.82
Tmem54Q9D7S1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.2■□□□□ 0.82
Tmem54Q9D7S1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.2■□□□□ 0.82
Tmem54Q9D7S1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tmem54Q9D7S1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmem54Q9D7S1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms