Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smurf1Q9CUN6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Smurf1Q9CUN6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21■□□□□ 0.95
Smurf1Q9CUN6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smurf1Q9CUN6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smurf1Q9CUN6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smurf1Q9CUN6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smurf1Q9CUN6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smurf1Q9CUN6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smurf1Q9CUN6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smurf1Q9CUN6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smurf1Q9CUN6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smurf1Q9CUN6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smurf1Q9CUN6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Smurf1Q9CUN6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smurf1Q9CUN6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smurf1Q9CUN6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smurf1Q9CUN6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smurf1Q9CUN6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smurf1Q9CUN6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.95■□□□□ 0.94
Smurf1Q9CUN6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smurf1Q9CUN6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smurf1Q9CUN6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smurf1Q9CUN6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smurf1Q9CUN6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smurf1Q9CUN6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smurf1Q9CUN6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smurf1Q9CUN6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smurf1Q9CUN6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.93■□□□□ 0.94
Smurf1Q9CUN6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smurf1Q9CUN6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smurf1Q9CUN6 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.92■□□□□ 0.94
Smurf1Q9CUN6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.92■□□□□ 0.94
Smurf1Q9CUN6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smurf1Q9CUN6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Smurf1Q9CUN6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smurf1Q9CUN6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smurf1Q9CUN6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smurf1Q9CUN6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smurf1Q9CUN6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smurf1Q9CUN6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smurf1Q9CUN6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smurf1Q9CUN6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smurf1Q9CUN6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.88■□□□□ 0.93
Smurf1Q9CUN6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smurf1Q9CUN6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smurf1Q9CUN6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smurf1Q9CUN6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Smurf1Q9CUN6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smurf1Q9CUN6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smurf1Q9CUN6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smurf1Q9CUN6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.84■□□□□ 0.93
Smurf1Q9CUN6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.84■□□□□ 0.93
Smurf1Q9CUN6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smurf1Q9CUN6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smurf1Q9CUN6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smurf1Q9CUN6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smurf1Q9CUN6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smurf1Q9CUN6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smurf1Q9CUN6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smurf1Q9CUN6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smurf1Q9CUN6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smurf1Q9CUN6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms