Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rQ99PI8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rQ99PI8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rQ99PI8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn4rQ99PI8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rQ99PI8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rQ99PI8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtn4rQ99PI8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.49■□□□□ 0.87
Rtn4rQ99PI8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rQ99PI8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rQ99PI8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rQ99PI8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn4rQ99PI8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn4rQ99PI8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.48■□□□□ 0.87
Rtn4rQ99PI8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn4rQ99PI8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.48■□□□□ 0.87
Rtn4rQ99PI8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rQ99PI8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rQ99PI8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4rQ99PI8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4rQ99PI8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4rQ99PI8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.45■□□□□ 0.86
Rtn4rQ99PI8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.45■□□□□ 0.86
Rtn4rQ99PI8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rQ99PI8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rQ99PI8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rQ99PI8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rtn4rQ99PI8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4rQ99PI8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rQ99PI8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rQ99PI8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rQ99PI8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rQ99PI8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rQ99PI8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rQ99PI8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rQ99PI8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtn4rQ99PI8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rQ99PI8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rtn4rQ99PI8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rQ99PI8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rQ99PI8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rQ99PI8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4rQ99PI8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4rQ99PI8 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.38■□□□□ 0.85
Rtn4rQ99PI8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rtn4rQ99PI8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn4rQ99PI8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn4rQ99PI8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.37■□□□□ 0.85
Rtn4rQ99PI8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn4rQ99PI8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rtn4rQ99PI8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn4rQ99PI8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rQ99PI8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rQ99PI8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rQ99PI8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rQ99PI8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rQ99PI8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rQ99PI8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rQ99PI8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.33■□□□□ 0.85
Rtn4rQ99PI8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rtn4rQ99PI8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.33■□□□□ 0.84
Rtn4rQ99PI8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtn4rQ99PI8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rQ99PI8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rtn4rQ99PI8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.32■□□□□ 0.84
Rtn4rQ99PI8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rQ99PI8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rQ99PI8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rtn4rQ99PI8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rtn4rQ99PI8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.31■□□□□ 0.84
Rtn4rQ99PI8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn4rQ99PI8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rtn4rQ99PI8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
Rtn4rQ99PI8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn4rQ99PI8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rQ99PI8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.29■□□□□ 0.84
Rtn4rQ99PI8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rQ99PI8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtn4rQ99PI8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 Gm4799-201ENSMUST00000095396 657 ntBASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Rtn4rQ99PI8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rQ99PI8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.27■□□□□ 0.84
Rtn4rQ99PI8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.27■□□□□ 0.84
Rtn4rQ99PI8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rtn4rQ99PI8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rQ99PI8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Rtn4rQ99PI8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rQ99PI8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rQ99PI8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn4rQ99PI8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn4rQ99PI8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Rtn4rQ99PI8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rQ99PI8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rQ99PI8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rQ99PI8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms