Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.12■■□□□ 1.13
Nkx6-1Q99MA9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nkx6-1Q99MA9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nkx6-1Q99MA9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nkx6-1Q99MA9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nkx6-1Q99MA9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Nkx6-1Q99MA9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.11■■□□□ 1.13
Nkx6-1Q99MA9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.11■■□□□ 1.13
Nkx6-1Q99MA9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.11■■□□□ 1.13
Nkx6-1Q99MA9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nkx6-1Q99MA9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.1■■□□□ 1.13
Nkx6-1Q99MA9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Nkx6-1Q99MA9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx6-1Q99MA9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx6-1Q99MA9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.08■■□□□ 1.13
Nkx6-1Q99MA9 Gm10420-201ENSMUST00000121713 882 ntBASIC22.08■■□□□ 1.13
Nkx6-1Q99MA9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx6-1Q99MA9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx6-1Q99MA9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Nkx6-1Q99MA9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.07■■□□□ 1.12
Nkx6-1Q99MA9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx6-1Q99MA9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx6-1Q99MA9 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.05■■□□□ 1.12
Nkx6-1Q99MA9 Gm5921-201ENSMUST00000075898 882 ntBASIC22.05■■□□□ 1.12
Nkx6-1Q99MA9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx6-1Q99MA9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx6-1Q99MA9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx6-1Q99MA9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx6-1Q99MA9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nkx6-1Q99MA9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nkx6-1Q99MA9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nkx6-1Q99MA9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.03■■□□□ 1.12
Nkx6-1Q99MA9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx6-1Q99MA9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx6-1Q99MA9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx6-1Q99MA9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx6-1Q99MA9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx6-1Q99MA9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Nkx6-1Q99MA9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx6-1Q99MA9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx6-1Q99MA9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx6-1Q99MA9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22■■□□□ 1.11
Nkx6-1Q99MA9 Gm9812-201ENSMUST00000061934 968 ntBASIC22■■□□□ 1.11
Nkx6-1Q99MA9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22■■□□□ 1.11
Nkx6-1Q99MA9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx6-1Q99MA9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.99■■□□□ 1.11
Nkx6-1Q99MA9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.99■■□□□ 1.11
Nkx6-1Q99MA9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx6-1Q99MA9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx6-1Q99MA9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx6-1Q99MA9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Nkx6-1Q99MA9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.98■■□□□ 1.11
Nkx6-1Q99MA9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.98■■□□□ 1.11
Nkx6-1Q99MA9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Nkx6-1Q99MA9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx6-1Q99MA9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Nkx6-1Q99MA9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.96■■□□□ 1.11
Nkx6-1Q99MA9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nkx6-1Q99MA9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nkx6-1Q99MA9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nkx6-1Q99MA9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.95■■□□□ 1.1
Nkx6-1Q99MA9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkx6-1Q99MA9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.94■■□□□ 1.1
Nkx6-1Q99MA9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.94■■□□□ 1.1
Nkx6-1Q99MA9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.93■■□□□ 1.1
Nkx6-1Q99MA9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkx6-1Q99MA9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Nkx6-1Q99MA9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.92■■□□□ 1.1
Nkx6-1Q99MA9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nkx6-1Q99MA9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Nkx6-1Q99MA9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Nkx6-1Q99MA9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx6-1Q99MA9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx6-1Q99MA9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Nkx6-1Q99MA9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.9■■□□□ 1.1
Nkx6-1Q99MA9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Nkx6-1Q99MA9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nkx6-1Q99MA9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Nkx6-1Q99MA9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx6-1Q99MA9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.89■■□□□ 1.09
Nkx6-1Q99MA9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nkx6-1Q99MA9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx6-1Q99MA9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx6-1Q99MA9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.88■■□□□ 1.09
Nkx6-1Q99MA9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx6-1Q99MA9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx6-1Q99MA9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms