Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhga3Q91XY5 Gm6821-201ENSMUST00000107540 542 ntBASIC20.51■□□□□ 0.87
Pcdhga3Q91XY5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdhga3Q91XY5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga3Q91XY5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhga3Q91XY5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga3Q91XY5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhga3Q91XY5 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.46■□□□□ 0.87
Pcdhga3Q91XY5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhga3Q91XY5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga3Q91XY5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga3Q91XY5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga3Q91XY5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Gm8503-201ENSMUST00000118131 455 ntBASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhga3Q91XY5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga3Q91XY5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga3Q91XY5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga3Q91XY5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga3Q91XY5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga3Q91XY5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Particl-201ENSMUST00000205370 1560 ntBASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga3Q91XY5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga3Q91XY5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga3Q91XY5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhga3Q91XY5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga3Q91XY5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga3Q91XY5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga3Q91XY5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga3Q91XY5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms