Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm37136-201ENSMUST00000194368 194 ntBASIC23.84■■□□□ 1.41
Pcdhb11Q91UZ8 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.83■■□□□ 1.41
Pcdhb11Q91UZ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhb11Q91UZ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.83■■□□□ 1.4
Pcdhb11Q91UZ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb11Q91UZ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb11Q91UZ8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb11Q91UZ8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb11Q91UZ8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb11Q91UZ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb11Q91UZ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.8■■□□□ 1.4
Pcdhb11Q91UZ8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb11Q91UZ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhb11Q91UZ8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.79■■□□□ 1.4
Pcdhb11Q91UZ8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Pcdhb11Q91UZ8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcdhb11Q91UZ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Pcdhb11Q91UZ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb11Q91UZ8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb11Q91UZ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
Pcdhb11Q91UZ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb11Q91UZ8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb11Q91UZ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb11Q91UZ8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb11Q91UZ8 Gm11599-201ENSMUST00000118720 878 ntBASIC23.75■■□□□ 1.39
Pcdhb11Q91UZ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb11Q91UZ8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb11Q91UZ8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
Pcdhb11Q91UZ8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb11Q91UZ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Pcdhb11Q91UZ8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb11Q91UZ8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb11Q91UZ8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Pcdhb11Q91UZ8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb11Q91UZ8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb11Q91UZ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb11Q91UZ8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb11Q91UZ8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb11Q91UZ8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.71■■□□□ 1.39
Pcdhb11Q91UZ8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.71■■□□□ 1.39
Pcdhb11Q91UZ8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb11Q91UZ8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb11Q91UZ8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
Pcdhb11Q91UZ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb11Q91UZ8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.7■■□□□ 1.38
Pcdhb11Q91UZ8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb11Q91UZ8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb11Q91UZ8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb11Q91UZ8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb11Q91UZ8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb11Q91UZ8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Pcdhb11Q91UZ8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.68■■□□□ 1.38
Pcdhb11Q91UZ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb11Q91UZ8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb11Q91UZ8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb11Q91UZ8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdhb11Q91UZ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb11Q91UZ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhb11Q91UZ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb11Q91UZ8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb11Q91UZ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb11Q91UZ8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb11Q91UZ8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb11Q91UZ8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb11Q91UZ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
Pcdhb11Q91UZ8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pcdhb11Q91UZ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb11Q91UZ8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb11Q91UZ8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb11Q91UZ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.6■■□□□ 1.37
Pcdhb11Q91UZ8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb11Q91UZ8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb11Q91UZ8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb11Q91UZ8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb11Q91UZ8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb11Q91UZ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb11Q91UZ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb11Q91UZ8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb11Q91UZ8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb11Q91UZ8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb11Q91UZ8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb11Q91UZ8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb11Q91UZ8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb11Q91UZ8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb11Q91UZ8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb11Q91UZ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhb11Q91UZ8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb11Q91UZ8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb11Q91UZ8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb11Q91UZ8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.55■■□□□ 1.36
Pcdhb11Q91UZ8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb11Q91UZ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb11Q91UZ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb11Q91UZ8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb11Q91UZ8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb11Q91UZ8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Pcdhb11Q91UZ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Pcdhb11Q91UZ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Pcdhb11Q91UZ8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb11Q91UZ8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms