Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.39■□□□□ 0.69
H1fooQ8VIK3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H1fooQ8VIK3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.38■□□□□ 0.69
H1fooQ8VIK3 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.38■□□□□ 0.69
H1fooQ8VIK3 Particl-201ENSMUST00000205370 1560 ntBASIC19.38■□□□□ 0.69
H1fooQ8VIK3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
H1fooQ8VIK3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.37■□□□□ 0.69
H1fooQ8VIK3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.37■□□□□ 0.69
H1fooQ8VIK3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H1fooQ8VIK3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
H1fooQ8VIK3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H1fooQ8VIK3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
H1fooQ8VIK3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.36■□□□□ 0.69
H1fooQ8VIK3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H1fooQ8VIK3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H1fooQ8VIK3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H1fooQ8VIK3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.35■□□□□ 0.69
H1fooQ8VIK3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H1fooQ8VIK3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H1fooQ8VIK3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H1fooQ8VIK3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H1fooQ8VIK3 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.34■□□□□ 0.69
H1fooQ8VIK3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
H1fooQ8VIK3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H1fooQ8VIK3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H1fooQ8VIK3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H1fooQ8VIK3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H1fooQ8VIK3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H1fooQ8VIK3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
H1fooQ8VIK3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.32■□□□□ 0.68
H1fooQ8VIK3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H1fooQ8VIK3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
H1fooQ8VIK3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
H1fooQ8VIK3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H1fooQ8VIK3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H1fooQ8VIK3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H1fooQ8VIK3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H1fooQ8VIK3 Gm6821-201ENSMUST00000107540 542 ntBASIC19.29■□□□□ 0.68
H1fooQ8VIK3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H1fooQ8VIK3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
H1fooQ8VIK3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H1fooQ8VIK3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H1fooQ8VIK3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.28■□□□□ 0.68
H1fooQ8VIK3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
H1fooQ8VIK3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
H1fooQ8VIK3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H1fooQ8VIK3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H1fooQ8VIK3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H1fooQ8VIK3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
H1fooQ8VIK3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.27■□□□□ 0.68
H1fooQ8VIK3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
H1fooQ8VIK3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H1fooQ8VIK3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H1fooQ8VIK3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H1fooQ8VIK3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H1fooQ8VIK3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H1fooQ8VIK3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H1fooQ8VIK3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H1fooQ8VIK3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H1fooQ8VIK3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.24■□□□□ 0.67
H1fooQ8VIK3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H1fooQ8VIK3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H1fooQ8VIK3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H1fooQ8VIK3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H1fooQ8VIK3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H1fooQ8VIK3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H1fooQ8VIK3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
H1fooQ8VIK3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H1fooQ8VIK3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
H1fooQ8VIK3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H1fooQ8VIK3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.21■□□□□ 0.67
H1fooQ8VIK3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
H1fooQ8VIK3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.2■□□□□ 0.66
H1fooQ8VIK3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
H1fooQ8VIK3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H1fooQ8VIK3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H1fooQ8VIK3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.19■□□□□ 0.66
H1fooQ8VIK3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H1fooQ8VIK3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H1fooQ8VIK3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H1fooQ8VIK3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H1fooQ8VIK3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
H1fooQ8VIK3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H1fooQ8VIK3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.17■□□□□ 0.66
H1fooQ8VIK3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
H1fooQ8VIK3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H1fooQ8VIK3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
H1fooQ8VIK3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
H1fooQ8VIK3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H1fooQ8VIK3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms