Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Odf4Q8VI88 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Odf4Q8VI88 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Odf4Q8VI88 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Odf4Q8VI88 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Odf4Q8VI88 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.48■□□□□ 0.87
Odf4Q8VI88 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.48■□□□□ 0.87
Odf4Q8VI88 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Odf4Q8VI88 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Odf4Q8VI88 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.47■□□□□ 0.87
Odf4Q8VI88 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.47■□□□□ 0.87
Odf4Q8VI88 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Odf4Q8VI88 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.47■□□□□ 0.87
Odf4Q8VI88 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Odf4Q8VI88 Gm11599-201ENSMUST00000118720 878 ntBASIC20.46■□□□□ 0.87
Odf4Q8VI88 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Odf4Q8VI88 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Odf4Q8VI88 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Odf4Q8VI88 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Odf4Q8VI88 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Odf4Q8VI88 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Odf4Q8VI88 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.45■□□□□ 0.86
Odf4Q8VI88 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Odf4Q8VI88 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Odf4Q8VI88 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Odf4Q8VI88 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Odf4Q8VI88 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Odf4Q8VI88 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.44■□□□□ 0.86
Odf4Q8VI88 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Odf4Q8VI88 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Odf4Q8VI88 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.43■□□□□ 0.86
Odf4Q8VI88 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.43■□□□□ 0.86
Odf4Q8VI88 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Odf4Q8VI88 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Odf4Q8VI88 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Odf4Q8VI88 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Odf4Q8VI88 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Odf4Q8VI88 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Odf4Q8VI88 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Odf4Q8VI88 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Odf4Q8VI88 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Odf4Q8VI88 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Odf4Q8VI88 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.4■□□□□ 0.86
Odf4Q8VI88 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Odf4Q8VI88 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Odf4Q8VI88 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Odf4Q8VI88 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Odf4Q8VI88 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.38■□□□□ 0.85
Odf4Q8VI88 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.38■□□□□ 0.85
Odf4Q8VI88 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Odf4Q8VI88 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Odf4Q8VI88 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Odf4Q8VI88 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Odf4Q8VI88 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Odf4Q8VI88 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Odf4Q8VI88 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Odf4Q8VI88 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Odf4Q8VI88 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Odf4Q8VI88 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Odf4Q8VI88 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Odf4Q8VI88 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Odf4Q8VI88 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Odf4Q8VI88 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
Odf4Q8VI88 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Odf4Q8VI88 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Odf4Q8VI88 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Odf4Q8VI88 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Odf4Q8VI88 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Odf4Q8VI88 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.32■□□□□ 0.84
Odf4Q8VI88 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Odf4Q8VI88 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Odf4Q8VI88 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Odf4Q8VI88 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Odf4Q8VI88 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Odf4Q8VI88 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Odf4Q8VI88 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Odf4Q8VI88 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Odf4Q8VI88 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Odf4Q8VI88 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Odf4Q8VI88 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Odf4Q8VI88 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Odf4Q8VI88 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Odf4Q8VI88 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.29■□□□□ 0.84
Odf4Q8VI88 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Odf4Q8VI88 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Odf4Q8VI88 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Odf4Q8VI88 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.28■□□□□ 0.84
Odf4Q8VI88 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.28■□□□□ 0.84
Odf4Q8VI88 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Odf4Q8VI88 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Odf4Q8VI88 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Odf4Q8VI88 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Odf4Q8VI88 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Odf4Q8VI88 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Odf4Q8VI88 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.27■□□□□ 0.84
Odf4Q8VI88 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Odf4Q8VI88 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Odf4Q8VI88 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Odf4Q8VI88 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms