Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ttc39cQ8VE09 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ttc39cQ8VE09 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Ttc39cQ8VE09 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.91■■□□□ 1.42
Ttc39cQ8VE09 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Ttc39cQ8VE09 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ttc39cQ8VE09 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc39cQ8VE09 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ttc39cQ8VE09 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Ttc39cQ8VE09 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc39cQ8VE09 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Gm4799-201ENSMUST00000095396 657 ntBASIC23.87■■□□□ 1.41
Ttc39cQ8VE09 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ttc39cQ8VE09 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ttc39cQ8VE09 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ttc39cQ8VE09 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ttc39cQ8VE09 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ttc39cQ8VE09 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ttc39cQ8VE09 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ttc39cQ8VE09 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ttc39cQ8VE09 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ttc39cQ8VE09 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ttc39cQ8VE09 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ttc39cQ8VE09 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ttc39cQ8VE09 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.83■■□□□ 1.41
Ttc39cQ8VE09 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ttc39cQ8VE09 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ttc39cQ8VE09 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ttc39cQ8VE09 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.81■■□□□ 1.4
Ttc39cQ8VE09 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.81■■□□□ 1.4
Ttc39cQ8VE09 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ttc39cQ8VE09 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.8■■□□□ 1.4
Ttc39cQ8VE09 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ttc39cQ8VE09 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.78■■□□□ 1.4
Ttc39cQ8VE09 Mir3960-201ENSMUST00000198213 73 ntBASIC23.78■■□□□ 1.4
Ttc39cQ8VE09 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
Ttc39cQ8VE09 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ttc39cQ8VE09 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.77■■□□□ 1.4
Ttc39cQ8VE09 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ttc39cQ8VE09 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Gm11175-201ENSMUST00000116172 543 ntBASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Mir6538-201ENSMUST00000183713 110 ntBASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39cQ8VE09 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ttc39cQ8VE09 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ttc39cQ8VE09 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ttc39cQ8VE09 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ttc39cQ8VE09 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ttc39cQ8VE09 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.74■■□□□ 1.39
Ttc39cQ8VE09 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.74■■□□□ 1.39
Ttc39cQ8VE09 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ttc39cQ8VE09 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ttc39cQ8VE09 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ttc39cQ8VE09 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.73■■□□□ 1.39
Ttc39cQ8VE09 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ttc39cQ8VE09 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ttc39cQ8VE09 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ttc39cQ8VE09 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ttc39cQ8VE09 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.72■■□□□ 1.39
Ttc39cQ8VE09 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ttc39cQ8VE09 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ttc39cQ8VE09 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39cQ8VE09 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39cQ8VE09 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.71■■□□□ 1.39
Ttc39cQ8VE09 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39cQ8VE09 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39cQ8VE09 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ttc39cQ8VE09 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.7■■□□□ 1.38
Ttc39cQ8VE09 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ttc39cQ8VE09 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.69■■□□□ 1.38
Ttc39cQ8VE09 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ttc39cQ8VE09 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.68■■□□□ 1.38
Ttc39cQ8VE09 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.68■■□□□ 1.38
Ttc39cQ8VE09 Gm45364-201ENSMUST00000210883 159 ntBASIC23.68■■□□□ 1.38
Ttc39cQ8VE09 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ttc39cQ8VE09 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39cQ8VE09 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39cQ8VE09 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39cQ8VE09 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39cQ8VE09 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39cQ8VE09 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc39cQ8VE09 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ttc39cQ8VE09 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc39cQ8VE09 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc39cQ8VE09 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ttc39cQ8VE09 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Ttc39cQ8VE09 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ttc39cQ8VE09 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ttc39cQ8VE09 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms