Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Sh3kbp1Q8R550 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.91■■□□□ 1.42
Sh3kbp1Q8R550 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.91■■□□□ 1.42
Sh3kbp1Q8R550 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.91■■□□□ 1.42
Sh3kbp1Q8R550 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 Gm6311-201ENSMUST00000073790 878 ntBASIC23.9■■□□□ 1.42
Sh3kbp1Q8R550 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3kbp1Q8R550 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.89■■□□□ 1.41
Sh3kbp1Q8R550 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Sh3kbp1Q8R550 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3kbp1Q8R550 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Sh3kbp1Q8R550 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.86■■□□□ 1.41
Sh3kbp1Q8R550 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Sh3kbp1Q8R550 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3kbp1Q8R550 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3kbp1Q8R550 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.84■■□□□ 1.41
Sh3kbp1Q8R550 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.83■■□□□ 1.41
Sh3kbp1Q8R550 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3kbp1Q8R550 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Sh3kbp1Q8R550 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3kbp1Q8R550 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3kbp1Q8R550 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3kbp1Q8R550 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Sh3kbp1Q8R550 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3kbp1Q8R550 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3kbp1Q8R550 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3kbp1Q8R550 Cap2-205ENSMUST00000225824 1634 ntBASIC23.77■■□□□ 1.4
Sh3kbp1Q8R550 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3kbp1Q8R550 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.77■■□□□ 1.4
Sh3kbp1Q8R550 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3kbp1Q8R550 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3kbp1Q8R550 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3kbp1Q8R550 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.74■■□□□ 1.39
Sh3kbp1Q8R550 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3kbp1Q8R550 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3kbp1Q8R550 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sh3kbp1Q8R550 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Sh3kbp1Q8R550 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sh3kbp1Q8R550 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.71■■□□□ 1.39
Sh3kbp1Q8R550 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sh3kbp1Q8R550 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3kbp1Q8R550 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh3kbp1Q8R550 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3kbp1Q8R550 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sh3kbp1Q8R550 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3kbp1Q8R550 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sh3kbp1Q8R550 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Sh3kbp1Q8R550 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.64■■□□□ 1.37
Sh3kbp1Q8R550 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh3kbp1Q8R550 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.62■■□□□ 1.37
Sh3kbp1Q8R550 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.61■■□□□ 1.37
Sh3kbp1Q8R550 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3kbp1Q8R550 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Sh3kbp1Q8R550 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 Scarna2-201ENSMUST00000157560 414 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms