Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tm6sf2Q8R1J1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Tm6sf2Q8R1J1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tm6sf2Q8R1J1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.84■■□□□ 1.09
Tm6sf2Q8R1J1 Gm6311-201ENSMUST00000073790 878 ntBASIC21.84■■□□□ 1.09
Tm6sf2Q8R1J1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tm6sf2Q8R1J1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Tm6sf2Q8R1J1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Tm6sf2Q8R1J1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.82■■□□□ 1.08
Tm6sf2Q8R1J1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tm6sf2Q8R1J1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tm6sf2Q8R1J1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tm6sf2Q8R1J1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.81■■□□□ 1.08
Tm6sf2Q8R1J1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tm6sf2Q8R1J1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tm6sf2Q8R1J1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tm6sf2Q8R1J1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tm6sf2Q8R1J1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tm6sf2Q8R1J1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.79■■□□□ 1.08
Tm6sf2Q8R1J1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tm6sf2Q8R1J1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tm6sf2Q8R1J1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tm6sf2Q8R1J1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Tm6sf2Q8R1J1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tm6sf2Q8R1J1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tm6sf2Q8R1J1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tm6sf2Q8R1J1 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.77■■□□□ 1.08
Tm6sf2Q8R1J1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tm6sf2Q8R1J1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tm6sf2Q8R1J1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Tm6sf2Q8R1J1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tm6sf2Q8R1J1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.76■■□□□ 1.07
Tm6sf2Q8R1J1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tm6sf2Q8R1J1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tm6sf2Q8R1J1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tm6sf2Q8R1J1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.75■■□□□ 1.07
Tm6sf2Q8R1J1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tm6sf2Q8R1J1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Tm6sf2Q8R1J1 Mir3960-201ENSMUST00000198213 73 ntBASIC21.74■■□□□ 1.07
Tm6sf2Q8R1J1 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.74■■□□□ 1.07
Tm6sf2Q8R1J1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tm6sf2Q8R1J1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.73■■□□□ 1.07
Tm6sf2Q8R1J1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tm6sf2Q8R1J1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.73■■□□□ 1.07
Tm6sf2Q8R1J1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.72■■□□□ 1.07
Tm6sf2Q8R1J1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tm6sf2Q8R1J1 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.71■■□□□ 1.07
Tm6sf2Q8R1J1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tm6sf2Q8R1J1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.7■■□□□ 1.06
Tm6sf2Q8R1J1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tm6sf2Q8R1J1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.69■■□□□ 1.06
Tm6sf2Q8R1J1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tm6sf2Q8R1J1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tm6sf2Q8R1J1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Tm6sf2Q8R1J1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tm6sf2Q8R1J1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tm6sf2Q8R1J1 Gm45364-201ENSMUST00000210883 159 ntBASIC21.68■■□□□ 1.06
Tm6sf2Q8R1J1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tm6sf2Q8R1J1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tm6sf2Q8R1J1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tm6sf2Q8R1J1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tm6sf2Q8R1J1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tm6sf2Q8R1J1 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.67■■□□□ 1.06
Tm6sf2Q8R1J1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tm6sf2Q8R1J1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tm6sf2Q8R1J1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tm6sf2Q8R1J1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tm6sf2Q8R1J1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.64■■□□□ 1.05
Tm6sf2Q8R1J1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tm6sf2Q8R1J1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tm6sf2Q8R1J1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tm6sf2Q8R1J1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tm6sf2Q8R1J1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.62■■□□□ 1.05
Tm6sf2Q8R1J1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tm6sf2Q8R1J1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tm6sf2Q8R1J1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tm6sf2Q8R1J1 Gm11175-201ENSMUST00000116172 543 ntBASIC21.61■■□□□ 1.05
Tm6sf2Q8R1J1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tm6sf2Q8R1J1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tm6sf2Q8R1J1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tm6sf2Q8R1J1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tm6sf2Q8R1J1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tm6sf2Q8R1J1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tm6sf2Q8R1J1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tm6sf2Q8R1J1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tm6sf2Q8R1J1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms