Protein–RNA interactions for Protein: Q8NE71

ABCF1, ATP-binding cassette sub-family F member 1, humanhuman

Known RBP eCLIP

Length 845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1Q8NE71 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.3■■□□□ 1.485e-9■□□□□ 8
ABCF1Q8NE71 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.93■■□□□ 1.425e-9■□□□□ 8
ABCF1Q8NE71 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.58■■□□□ 1.375e-9■□□□□ 8
ABCF1Q8NE71 LMNA-216ENST00000496738 2405 ntTSL 223.52■■□□□ 1.365e-9■□□□□ 8
ABCF1Q8NE71 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC23.22■■□□□ 1.315e-9■□□□□ 8
ABCF1Q8NE71 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC22.41■■□□□ 1.185e-9■□□□□ 8
ABCF1Q8NE71 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.58■□□□□ 0.885e-9■□□□□ 8
ABCF1Q8NE71 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.4■□□□□ 0.545e-9■□□□□ 8
ABCF1Q8NE71 LMNA-220ENST00000504687 546 ntTSL 418.36■□□□□ 0.535e-9■□□□□ 8
ABCF1Q8NE71 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.419e-7■□□□□ 8
ABCF1Q8NE71 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.165e-9■□□□□ 8
Retrieved 11 of 811 protein–RNA pairs in 6.5 ms