Protein–RNA interactions for Protein: Q8NE71

ABCF1, ATP-binding cassette sub-family F member 1, humanhuman

Known RBP eCLIP

Length 845 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1Q8NE71 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.3■■□□□ 1.485e-9■□□□□ 8
ABCF1Q8NE71 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.93■■□□□ 1.425e-9■□□□□ 8
ABCF1Q8NE71 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.58■■□□□ 1.375e-9■□□□□ 8
ABCF1Q8NE71 LMNA-216ENST00000496738 2405 ntTSL 223.52■■□□□ 1.365e-9■□□□□ 8
ABCF1Q8NE71 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC23.22■■□□□ 1.315e-9■□□□□ 8
ABCF1Q8NE71 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC22.41■■□□□ 1.185e-9■□□□□ 8
ABCF1Q8NE71 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.58■□□□□ 0.885e-9■□□□□ 8
ABCF1Q8NE71 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.4■□□□□ 0.545e-9■□□□□ 8
ABCF1Q8NE71 LMNA-220ENST00000504687 546 ntTSL 418.36■□□□□ 0.535e-9■□□□□ 8
ABCF1Q8NE71 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.419e-7■□□□□ 8
ABCF1Q8NE71 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.165e-9■□□□□ 8
Retrieved 11 of 811 protein–RNA pairs in 4.3 ms