Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alms1Q8K4E0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alms1Q8K4E0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Alms1Q8K4E0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.15■■□□□ 1.3
Alms1Q8K4E0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Alms1Q8K4E0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alms1Q8K4E0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Alms1Q8K4E0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Alms1Q8K4E0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.13■■□□□ 1.29
Alms1Q8K4E0 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.12■■□□□ 1.29
Alms1Q8K4E0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Alms1Q8K4E0 Gm7332-201ENSMUST00000118351 454 ntBASIC23.11■■□□□ 1.29
Alms1Q8K4E0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Alms1Q8K4E0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Alms1Q8K4E0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Alms1Q8K4E0 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.1■■□□□ 1.29
Alms1Q8K4E0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Alms1Q8K4E0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Alms1Q8K4E0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.09■■□□□ 1.29
Alms1Q8K4E0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Alms1Q8K4E0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Alms1Q8K4E0 Gm27502-201ENSMUST00000183495 199 ntBASIC23.08■■□□□ 1.29
Alms1Q8K4E0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Alms1Q8K4E0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Alms1Q8K4E0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Alms1Q8K4E0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Alms1Q8K4E0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Alms1Q8K4E0 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.06■■□□□ 1.28
Alms1Q8K4E0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Alms1Q8K4E0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Alms1Q8K4E0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.05■■□□□ 1.28
Alms1Q8K4E0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Alms1Q8K4E0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Alms1Q8K4E0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Alms1Q8K4E0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.03■■□□□ 1.28
Alms1Q8K4E0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.03■■□□□ 1.28
Alms1Q8K4E0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Alms1Q8K4E0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Alms1Q8K4E0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Alms1Q8K4E0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Alms1Q8K4E0 Gm14523-201ENSMUST00000117260 558 ntBASIC23.03■■□□□ 1.28
Alms1Q8K4E0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Alms1Q8K4E0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.02■■□□□ 1.28
Alms1Q8K4E0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
Alms1Q8K4E0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Alms1Q8K4E0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.02■■□□□ 1.28
Alms1Q8K4E0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Alms1Q8K4E0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Alms1Q8K4E0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Alms1Q8K4E0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Alms1Q8K4E0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Alms1Q8K4E0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Alms1Q8K4E0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Alms1Q8K4E0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Alms1Q8K4E0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Alms1Q8K4E0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Alms1Q8K4E0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Alms1Q8K4E0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Alms1Q8K4E0 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.98■■□□□ 1.27
Alms1Q8K4E0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Alms1Q8K4E0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.97■■□□□ 1.27
Alms1Q8K4E0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Alms1Q8K4E0 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.97■■□□□ 1.27
Alms1Q8K4E0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.97■■□□□ 1.27
Alms1Q8K4E0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Alms1Q8K4E0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Alms1Q8K4E0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Alms1Q8K4E0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Alms1Q8K4E0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.95■■□□□ 1.27
Alms1Q8K4E0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Alms1Q8K4E0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Alms1Q8K4E0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.95■■□□□ 1.26
Alms1Q8K4E0 Mir3960-201ENSMUST00000198213 73 ntBASIC22.94■■□□□ 1.26
Alms1Q8K4E0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Alms1Q8K4E0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
Alms1Q8K4E0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Alms1Q8K4E0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Alms1Q8K4E0 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.93■■□□□ 1.26
Alms1Q8K4E0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Alms1Q8K4E0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Alms1Q8K4E0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.93■■□□□ 1.26
Alms1Q8K4E0 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.92■■□□□ 1.26
Alms1Q8K4E0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Alms1Q8K4E0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Alms1Q8K4E0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Alms1Q8K4E0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Alms1Q8K4E0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Alms1Q8K4E0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Alms1Q8K4E0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Alms1Q8K4E0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Alms1Q8K4E0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Alms1Q8K4E0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.88■■□□□ 1.25
Alms1Q8K4E0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Alms1Q8K4E0 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.87■■□□□ 1.25
Alms1Q8K4E0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Alms1Q8K4E0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Alms1Q8K4E0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.86■■□□□ 1.25
Alms1Q8K4E0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Alms1Q8K4E0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Alms1Q8K4E0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms