Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdc34Q8CFI2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Cdc34Q8CFI2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cdc34Q8CFI2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdc34Q8CFI2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdc34Q8CFI2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdc34Q8CFI2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdc34Q8CFI2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdc34Q8CFI2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdc34Q8CFI2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdc34Q8CFI2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdc34Q8CFI2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdc34Q8CFI2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdc34Q8CFI2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdc34Q8CFI2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdc34Q8CFI2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdc34Q8CFI2 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.47■□□□□ 0.55
Cdc34Q8CFI2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdc34Q8CFI2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cdc34Q8CFI2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Cdc34Q8CFI2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdc34Q8CFI2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdc34Q8CFI2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdc34Q8CFI2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdc34Q8CFI2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc34Q8CFI2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc34Q8CFI2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc34Q8CFI2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc34Q8CFI2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Gm26115-201ENSMUST00000175605 87 ntBASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc34Q8CFI2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc34Q8CFI2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdc34Q8CFI2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms