Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco1Q8CEZ1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco1Q8CEZ1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco1Q8CEZ1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco1Q8CEZ1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Smco1Q8CEZ1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smco1Q8CEZ1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smco1Q8CEZ1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smco1Q8CEZ1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smco1Q8CEZ1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smco1Q8CEZ1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco1Q8CEZ1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco1Q8CEZ1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Smco1Q8CEZ1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco1Q8CEZ1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco1Q8CEZ1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.17■□□□□ 0.98
Smco1Q8CEZ1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco1Q8CEZ1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Smco1Q8CEZ1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smco1Q8CEZ1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco1Q8CEZ1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smco1Q8CEZ1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Smco1Q8CEZ1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco1Q8CEZ1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco1Q8CEZ1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smco1Q8CEZ1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smco1Q8CEZ1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smco1Q8CEZ1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Smco1Q8CEZ1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smco1Q8CEZ1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.14■□□□□ 0.97
Smco1Q8CEZ1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smco1Q8CEZ1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smco1Q8CEZ1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smco1Q8CEZ1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smco1Q8CEZ1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smco1Q8CEZ1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smco1Q8CEZ1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smco1Q8CEZ1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smco1Q8CEZ1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smco1Q8CEZ1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smco1Q8CEZ1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Smco1Q8CEZ1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Smco1Q8CEZ1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smco1Q8CEZ1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smco1Q8CEZ1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smco1Q8CEZ1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smco1Q8CEZ1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smco1Q8CEZ1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smco1Q8CEZ1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smco1Q8CEZ1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smco1Q8CEZ1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smco1Q8CEZ1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Smco1Q8CEZ1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smco1Q8CEZ1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smco1Q8CEZ1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smco1Q8CEZ1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smco1Q8CEZ1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.07■□□□□ 0.96
Smco1Q8CEZ1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smco1Q8CEZ1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smco1Q8CEZ1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smco1Q8CEZ1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smco1Q8CEZ1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smco1Q8CEZ1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smco1Q8CEZ1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smco1Q8CEZ1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smco1Q8CEZ1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smco1Q8CEZ1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smco1Q8CEZ1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smco1Q8CEZ1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smco1Q8CEZ1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smco1Q8CEZ1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smco1Q8CEZ1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.03■□□□□ 0.96
Smco1Q8CEZ1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Smco1Q8CEZ1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.02■□□□□ 0.96
Smco1Q8CEZ1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smco1Q8CEZ1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smco1Q8CEZ1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smco1Q8CEZ1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smco1Q8CEZ1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Smco1Q8CEZ1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smco1Q8CEZ1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.01■□□□□ 0.95
Smco1Q8CEZ1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smco1Q8CEZ1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smco1Q8CEZ1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smco1Q8CEZ1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smco1Q8CEZ1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smco1Q8CEZ1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms