Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.91■□□□□ 0.94
Lysmd4Q8CC84 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.91■□□□□ 0.94
Lysmd4Q8CC84 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.91■□□□□ 0.94
Lysmd4Q8CC84 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.91■□□□□ 0.94
Lysmd4Q8CC84 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.91■□□□□ 0.94
Lysmd4Q8CC84 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lysmd4Q8CC84 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lysmd4Q8CC84 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Lysmd4Q8CC84 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd4Q8CC84 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd4Q8CC84 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.88■□□□□ 0.93
Lysmd4Q8CC84 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd4Q8CC84 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd4Q8CC84 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.87■□□□□ 0.93
Lysmd4Q8CC84 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd4Q8CC84 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.87■□□□□ 0.93
Lysmd4Q8CC84 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Particl-201ENSMUST00000205370 1560 ntBASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd4Q8CC84 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lysmd4Q8CC84 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd4Q8CC84 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd4Q8CC84 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Lysmd4Q8CC84 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd4Q8CC84 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd4Q8CC84 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd4Q8CC84 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lysmd4Q8CC84 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lysmd4Q8CC84 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.83■□□□□ 0.93
Lysmd4Q8CC84 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Lysmd4Q8CC84 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lysmd4Q8CC84 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lysmd4Q8CC84 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd4Q8CC84 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lysmd4Q8CC84 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd4Q8CC84 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd4Q8CC84 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd4Q8CC84 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd4Q8CC84 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.81■□□□□ 0.92
Lysmd4Q8CC84 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd4Q8CC84 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd4Q8CC84 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd4Q8CC84 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd4Q8CC84 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd4Q8CC84 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Lysmd4Q8CC84 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lysmd4Q8CC84 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.79■□□□□ 0.92
Lysmd4Q8CC84 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Lysmd4Q8CC84 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.78■□□□□ 0.92
Lysmd4Q8CC84 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd4Q8CC84 Gm30023-201ENSMUST00000197970 889 ntBASIC20.78■□□□□ 0.92
Lysmd4Q8CC84 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lysmd4Q8CC84 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lysmd4Q8CC84 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Lysmd4Q8CC84 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd4Q8CC84 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd4Q8CC84 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd4Q8CC84 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd4Q8CC84 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.76■□□□□ 0.91
Lysmd4Q8CC84 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd4Q8CC84 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd4Q8CC84 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lysmd4Q8CC84 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd4Q8CC84 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd4Q8CC84 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd4Q8CC84 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lysmd4Q8CC84 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd4Q8CC84 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lysmd4Q8CC84 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lysmd4Q8CC84 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.72■□□□□ 0.91
Lysmd4Q8CC84 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lysmd4Q8CC84 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Lysmd4Q8CC84 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.7■□□□□ 0.91
Lysmd4Q8CC84 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd4Q8CC84 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd4Q8CC84 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd4Q8CC84 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.68■□□□□ 0.9
Lysmd4Q8CC84 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd4Q8CC84 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lysmd4Q8CC84 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lysmd4Q8CC84 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lysmd4Q8CC84 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd4Q8CC84 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd4Q8CC84 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd4Q8CC84 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.66■□□□□ 0.9
Lysmd4Q8CC84 Zfp131-205ENSMUST00000223812 663 ntBASIC20.66■□□□□ 0.9
Lysmd4Q8CC84 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd4Q8CC84 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms