Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm9949Q8C9F4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm9949Q8C9F4 Gm8503-201ENSMUST00000118131 455 ntBASIC18.39■□□□□ 0.53
Gm9949Q8C9F4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm9949Q8C9F4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Gm9949Q8C9F4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm9949Q8C9F4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm9949Q8C9F4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm9949Q8C9F4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gm9949Q8C9F4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm9949Q8C9F4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm9949Q8C9F4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm9949Q8C9F4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm9949Q8C9F4 Particl-201ENSMUST00000205370 1560 ntBASIC18.36■□□□□ 0.53
Gm9949Q8C9F4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm9949Q8C9F4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm9949Q8C9F4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm9949Q8C9F4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm9949Q8C9F4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm9949Q8C9F4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm9949Q8C9F4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm9949Q8C9F4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm9949Q8C9F4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm9949Q8C9F4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm9949Q8C9F4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm9949Q8C9F4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm9949Q8C9F4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm9949Q8C9F4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm9949Q8C9F4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm9949Q8C9F4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm9949Q8C9F4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm9949Q8C9F4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm9949Q8C9F4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm9949Q8C9F4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm9949Q8C9F4 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.29■□□□□ 0.52
Gm9949Q8C9F4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm9949Q8C9F4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm9949Q8C9F4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm9949Q8C9F4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm9949Q8C9F4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm9949Q8C9F4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm9949Q8C9F4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm9949Q8C9F4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Gm9949Q8C9F4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm9949Q8C9F4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm9949Q8C9F4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Gm9949Q8C9F4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm9949Q8C9F4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm9949Q8C9F4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm9949Q8C9F4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Gm9949Q8C9F4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gm9949Q8C9F4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm9949Q8C9F4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm9949Q8C9F4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm9949Q8C9F4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm9949Q8C9F4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm9949Q8C9F4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm9949Q8C9F4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm9949Q8C9F4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm9949Q8C9F4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm9949Q8C9F4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm9949Q8C9F4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm9949Q8C9F4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm9949Q8C9F4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm9949Q8C9F4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Gm9949Q8C9F4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm9949Q8C9F4 Gm37136-201ENSMUST00000194368 194 ntBASIC18.22■□□□□ 0.51
Gm9949Q8C9F4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm9949Q8C9F4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm9949Q8C9F4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm9949Q8C9F4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm9949Q8C9F4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm9949Q8C9F4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm9949Q8C9F4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm9949Q8C9F4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm9949Q8C9F4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm9949Q8C9F4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm9949Q8C9F4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm9949Q8C9F4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm9949Q8C9F4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Gm9949Q8C9F4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.17■□□□□ 0.5
Gm9949Q8C9F4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.17■□□□□ 0.5
Gm9949Q8C9F4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm9949Q8C9F4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm9949Q8C9F4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms