Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.34■■□□□ 1.65
Lin9Q8C735 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.34■■□□□ 1.65
Lin9Q8C735 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lin9Q8C735 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lin9Q8C735 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.33■■□□□ 1.65
Lin9Q8C735 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lin9Q8C735 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Lin9Q8C735 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Lin9Q8C735 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lin9Q8C735 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lin9Q8C735 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.3■■□□□ 1.64
Lin9Q8C735 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.3■■□□□ 1.64
Lin9Q8C735 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lin9Q8C735 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lin9Q8C735 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Lin9Q8C735 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Lin9Q8C735 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Lin9Q8C735 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Lin9Q8C735 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
Lin9Q8C735 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Lin9Q8C735 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.28■■□□□ 1.64
Lin9Q8C735 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Lin9Q8C735 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Lin9Q8C735 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lin9Q8C735 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lin9Q8C735 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lin9Q8C735 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.26■■□□□ 1.63
Lin9Q8C735 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lin9Q8C735 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lin9Q8C735 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.25■■□□□ 1.63
Lin9Q8C735 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.25■■□□□ 1.63
Lin9Q8C735 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Lin9Q8C735 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Lin9Q8C735 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Lin9Q8C735 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Lin9Q8C735 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.21■■□□□ 1.63
Lin9Q8C735 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.21■■□□□ 1.63
Lin9Q8C735 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lin9Q8C735 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Lin9Q8C735 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.2■■□□□ 1.62
Lin9Q8C735 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Lin9Q8C735 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Lin9Q8C735 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lin9Q8C735 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lin9Q8C735 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Lin9Q8C735 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.18■■□□□ 1.62
Lin9Q8C735 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Lin9Q8C735 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lin9Q8C735 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.17■■□□□ 1.62
Lin9Q8C735 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Lin9Q8C735 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lin9Q8C735 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Lin9Q8C735 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Lin9Q8C735 Particl-201ENSMUST00000205370 1560 ntBASIC25.15■■□□□ 1.62
Lin9Q8C735 Mir6538-201ENSMUST00000183713 110 ntBASIC25.15■■□□□ 1.62
Lin9Q8C735 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Lin9Q8C735 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Lin9Q8C735 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
Lin9Q8C735 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.61
Lin9Q8C735 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Lin9Q8C735 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Lin9Q8C735 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.13■■□□□ 1.61
Lin9Q8C735 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lin9Q8C735 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lin9Q8C735 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lin9Q8C735 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Lin9Q8C735 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Lin9Q8C735 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Lin9Q8C735 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Lin9Q8C735 Gm6311-201ENSMUST00000073790 878 ntBASIC25.1■■□□□ 1.61
Lin9Q8C735 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Lin9Q8C735 Gm11175-201ENSMUST00000116172 543 ntBASIC25.09■■□□□ 1.61
Lin9Q8C735 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Lin9Q8C735 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Lin9Q8C735 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Lin9Q8C735 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Lin9Q8C735 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lin9Q8C735 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Lin9Q8C735 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Lin9Q8C735 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.06■■□□□ 1.6
Lin9Q8C735 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lin9Q8C735 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lin9Q8C735 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Lin9Q8C735 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lin9Q8C735 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lin9Q8C735 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lin9Q8C735 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Lin9Q8C735 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Lin9Q8C735 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lin9Q8C735 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Lin9Q8C735 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Lin9Q8C735 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Lin9Q8C735 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Lin9Q8C735 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lin9Q8C735 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lin9Q8C735 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.01■■□□□ 1.59
Lin9Q8C735 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lin9Q8C735 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lin9Q8C735 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lin9Q8C735 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms