Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrtm1Q8BXQ3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.37■□□□□ 0.85
Lrtm1Q8BXQ3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lrtm1Q8BXQ3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrtm1Q8BXQ3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrtm1Q8BXQ3 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrtm1Q8BXQ3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrtm1Q8BXQ3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.34■□□□□ 0.85
Lrtm1Q8BXQ3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrtm1Q8BXQ3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrtm1Q8BXQ3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.31■□□□□ 0.84
Lrtm1Q8BXQ3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.3■□□□□ 0.84
Lrtm1Q8BXQ3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrtm1Q8BXQ3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrtm1Q8BXQ3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrtm1Q8BXQ3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrtm1Q8BXQ3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrtm1Q8BXQ3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrtm1Q8BXQ3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Lrtm1Q8BXQ3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrtm1Q8BXQ3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrtm1Q8BXQ3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrtm1Q8BXQ3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.25■□□□□ 0.83
Lrtm1Q8BXQ3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrtm1Q8BXQ3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrtm1Q8BXQ3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrtm1Q8BXQ3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.21■□□□□ 0.83
Lrtm1Q8BXQ3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Lrtm1Q8BXQ3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Lrtm1Q8BXQ3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrtm1Q8BXQ3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrtm1Q8BXQ3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrtm1Q8BXQ3 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.18■□□□□ 0.82
Lrtm1Q8BXQ3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrtm1Q8BXQ3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lrtm1Q8BXQ3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrtm1Q8BXQ3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrtm1Q8BXQ3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lrtm1Q8BXQ3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrtm1Q8BXQ3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrtm1Q8BXQ3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrtm1Q8BXQ3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.11■□□□□ 0.81
Lrtm1Q8BXQ3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lrtm1Q8BXQ3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrtm1Q8BXQ3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrtm1Q8BXQ3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms