Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm14523-201ENSMUST00000117260 558 ntBASIC31.77■■■□□ 2.68
Col16a1Q8BLX7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Col16a1Q8BLX7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Col16a1Q8BLX7 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.75■■■□□ 2.67
Col16a1Q8BLX7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Col16a1Q8BLX7 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.75■■■□□ 2.67
Col16a1Q8BLX7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Col16a1Q8BLX7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
Col16a1Q8BLX7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.74■■■□□ 2.67
Col16a1Q8BLX7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Col16a1Q8BLX7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Col16a1Q8BLX7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Col16a1Q8BLX7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Col16a1Q8BLX7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.71■■■□□ 2.67
Col16a1Q8BLX7 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.7■■■□□ 2.67
Col16a1Q8BLX7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Col16a1Q8BLX7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Col16a1Q8BLX7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Col16a1Q8BLX7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Col16a1Q8BLX7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Col16a1Q8BLX7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Col16a1Q8BLX7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Col16a1Q8BLX7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.66■■■□□ 2.66
Col16a1Q8BLX7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.66■■■□□ 2.66
Col16a1Q8BLX7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Col16a1Q8BLX7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
Col16a1Q8BLX7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Col16a1Q8BLX7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.62■■■□□ 2.65
Col16a1Q8BLX7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC31.62■■■□□ 2.65
Col16a1Q8BLX7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Col16a1Q8BLX7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Col16a1Q8BLX7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Col16a1Q8BLX7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Col16a1Q8BLX7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Col16a1Q8BLX7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Col16a1Q8BLX7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.6■■■□□ 2.65
Col16a1Q8BLX7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Col16a1Q8BLX7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Col16a1Q8BLX7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Col16a1Q8BLX7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Col16a1Q8BLX7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
Col16a1Q8BLX7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Col16a1Q8BLX7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Col16a1Q8BLX7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Col16a1Q8BLX7 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.57■■■□□ 2.64
Col16a1Q8BLX7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
Col16a1Q8BLX7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Col16a1Q8BLX7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Col16a1Q8BLX7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Col16a1Q8BLX7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Col16a1Q8BLX7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
Col16a1Q8BLX7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Col16a1Q8BLX7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Col16a1Q8BLX7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Col16a1Q8BLX7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
Col16a1Q8BLX7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Col16a1Q8BLX7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.54■■■□□ 2.64
Col16a1Q8BLX7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Col16a1Q8BLX7 Gm5812-201ENSMUST00000061073 957 ntBASIC31.53■■■□□ 2.64
Col16a1Q8BLX7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.52■■■□□ 2.64
Col16a1Q8BLX7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col16a1Q8BLX7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col16a1Q8BLX7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.52■■■□□ 2.64
Col16a1Q8BLX7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Col16a1Q8BLX7 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.51■■■□□ 2.64
Col16a1Q8BLX7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Col16a1Q8BLX7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
Col16a1Q8BLX7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Col16a1Q8BLX7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.5■■■□□ 2.63
Col16a1Q8BLX7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Col16a1Q8BLX7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Col16a1Q8BLX7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
Col16a1Q8BLX7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Col16a1Q8BLX7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Col16a1Q8BLX7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.46■■■□□ 2.63
Col16a1Q8BLX7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.46■■■□□ 2.63
Col16a1Q8BLX7 Gm9812-201ENSMUST00000061934 968 ntBASIC31.46■■■□□ 2.63
Col16a1Q8BLX7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Col16a1Q8BLX7 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.45■■■□□ 2.63
Col16a1Q8BLX7 Gm22567-201ENSMUST00000175542 342 ntBASIC31.45■■■□□ 2.63
Col16a1Q8BLX7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Col16a1Q8BLX7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Col16a1Q8BLX7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.43■■■□□ 2.62
Col16a1Q8BLX7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Col16a1Q8BLX7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Col16a1Q8BLX7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.42■■■□□ 2.62
Col16a1Q8BLX7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.42■■■□□ 2.62
Col16a1Q8BLX7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Col16a1Q8BLX7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Col16a1Q8BLX7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.41■■■□□ 2.62
Col16a1Q8BLX7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.41■■■□□ 2.62
Col16a1Q8BLX7 Gm14121-201ENSMUST00000121441 1380 ntBASIC31.41■■■□□ 2.62
Col16a1Q8BLX7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Col16a1Q8BLX7 Gm10420-201ENSMUST00000121713 882 ntBASIC31.39■■■□□ 2.62
Col16a1Q8BLX7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Col16a1Q8BLX7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC31.39■■■□□ 2.62
Col16a1Q8BLX7 Gm5921-201ENSMUST00000075898 882 ntBASIC31.39■■■□□ 2.62
Col16a1Q8BLX7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Col16a1Q8BLX7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Col16a1Q8BLX7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms