Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 Gm11599-201ENSMUST00000118720 878 ntBASIC25.16■■□□□ 1.62
Depdc1bQ8BH88 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1bQ8BH88 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1bQ8BH88 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1bQ8BH88 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.15■■□□□ 1.62
Depdc1bQ8BH88 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.15■■□□□ 1.62
Depdc1bQ8BH88 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Depdc1bQ8BH88 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.15■■□□□ 1.62
Depdc1bQ8BH88 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Depdc1bQ8BH88 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.14■■□□□ 1.62
Depdc1bQ8BH88 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Depdc1bQ8BH88 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Depdc1bQ8BH88 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Depdc1bQ8BH88 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.13■■□□□ 1.61
Depdc1bQ8BH88 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.13■■□□□ 1.61
Depdc1bQ8BH88 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Depdc1bQ8BH88 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1bQ8BH88 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1bQ8BH88 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1bQ8BH88 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1bQ8BH88 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Depdc1bQ8BH88 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.11■■□□□ 1.61
Depdc1bQ8BH88 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Depdc1bQ8BH88 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.09■■□□□ 1.61
Depdc1bQ8BH88 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.09■■□□□ 1.61
Depdc1bQ8BH88 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Depdc1bQ8BH88 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Depdc1bQ8BH88 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Depdc1bQ8BH88 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Depdc1bQ8BH88 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Depdc1bQ8BH88 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.07■■□□□ 1.6
Depdc1bQ8BH88 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.06■■□□□ 1.6
Depdc1bQ8BH88 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Depdc1bQ8BH88 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.05■■□□□ 1.6
Depdc1bQ8BH88 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.05■■□□□ 1.6
Depdc1bQ8BH88 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Depdc1bQ8BH88 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Depdc1bQ8BH88 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Depdc1bQ8BH88 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.04■■□□□ 1.6
Depdc1bQ8BH88 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Depdc1bQ8BH88 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Depdc1bQ8BH88 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Depdc1bQ8BH88 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1bQ8BH88 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1bQ8BH88 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Depdc1bQ8BH88 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1bQ8BH88 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1bQ8BH88 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25■■□□□ 1.59
Depdc1bQ8BH88 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Depdc1bQ8BH88 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1bQ8BH88 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1bQ8BH88 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1bQ8BH88 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1bQ8BH88 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1bQ8BH88 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1bQ8BH88 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Depdc1bQ8BH88 Particl-201ENSMUST00000205370 1560 ntBASIC24.97■■□□□ 1.59
Depdc1bQ8BH88 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Depdc1bQ8BH88 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.97■■□□□ 1.59
Depdc1bQ8BH88 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Depdc1bQ8BH88 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Depdc1bQ8BH88 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
Depdc1bQ8BH88 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1bQ8BH88 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1bQ8BH88 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1bQ8BH88 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Depdc1bQ8BH88 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Depdc1bQ8BH88 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Depdc1bQ8BH88 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1bQ8BH88 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1bQ8BH88 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1bQ8BH88 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1bQ8BH88 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1bQ8BH88 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1bQ8BH88 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.92■■□□□ 1.58
Depdc1bQ8BH88 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1bQ8BH88 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1bQ8BH88 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1bQ8BH88 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1bQ8BH88 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1bQ8BH88 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1bQ8BH88 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.9■■□□□ 1.58
Depdc1bQ8BH88 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Depdc1bQ8BH88 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.89■■□□□ 1.58
Depdc1bQ8BH88 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Depdc1bQ8BH88 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Depdc1bQ8BH88 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Depdc1bQ8BH88 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Depdc1bQ8BH88 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Depdc1bQ8BH88 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Depdc1bQ8BH88 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1bQ8BH88 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1bQ8BH88 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.87■■□□□ 1.57
Depdc1bQ8BH88 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.87■■□□□ 1.57
Depdc1bQ8BH88 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Depdc1bQ8BH88 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Depdc1bQ8BH88 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Depdc1bQ8BH88 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Depdc1bQ8BH88 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms