Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkhd1l1Q80ZA4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pkhd1l1Q80ZA4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC14.38□□□□□ -0.11
Pkhd1l1Q80ZA4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkhd1l1Q80ZA4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkhd1l1Q80ZA4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkhd1l1Q80ZA4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.37□□□□□ -0.11
Pkhd1l1Q80ZA4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkhd1l1Q80ZA4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkhd1l1Q80ZA4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pkhd1l1Q80ZA4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.37□□□□□ -0.11
Pkhd1l1Q80ZA4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pkhd1l1Q80ZA4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkhd1l1Q80ZA4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Gm9812-201ENSMUST00000061934 968 ntBASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pkhd1l1Q80ZA4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkhd1l1Q80ZA4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkhd1l1Q80ZA4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkhd1l1Q80ZA4 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.34□□□□□ -0.11
Pkhd1l1Q80ZA4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkhd1l1Q80ZA4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkhd1l1Q80ZA4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkhd1l1Q80ZA4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkhd1l1Q80ZA4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkhd1l1Q80ZA4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkhd1l1Q80ZA4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.31□□□□□ -0.12
Pkhd1l1Q80ZA4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkhd1l1Q80ZA4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pkhd1l1Q80ZA4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.29□□□□□ -0.12
Pkhd1l1Q80ZA4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.29□□□□□ -0.12
Pkhd1l1Q80ZA4 Gm5921-201ENSMUST00000075898 882 ntBASIC14.29□□□□□ -0.12
Pkhd1l1Q80ZA4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pkhd1l1Q80ZA4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pkhd1l1Q80ZA4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pkhd1l1Q80ZA4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pkhd1l1Q80ZA4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pkhd1l1Q80ZA4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pkhd1l1Q80ZA4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pkhd1l1Q80ZA4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pkhd1l1Q80ZA4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pkhd1l1Q80ZA4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pkhd1l1Q80ZA4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pkhd1l1Q80ZA4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pkhd1l1Q80ZA4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pkhd1l1Q80ZA4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 Gm37136-201ENSMUST00000194368 194 ntBASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkhd1l1Q80ZA4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Pkhd1l1Q80ZA4 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.24□□□□□ -0.13
Pkhd1l1Q80ZA4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Gm10420-201ENSMUST00000121713 882 ntBASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkhd1l1Q80ZA4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.22□□□□□ -0.13
Pkhd1l1Q80ZA4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC14.22□□□□□ -0.13
Pkhd1l1Q80ZA4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pkhd1l1Q80ZA4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.22□□□□□ -0.13
Pkhd1l1Q80ZA4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pkhd1l1Q80ZA4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkhd1l1Q80ZA4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms