Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Exosc3Q7TQK4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Exosc3Q7TQK4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Exosc3Q7TQK4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Exosc3Q7TQK4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Exosc3Q7TQK4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Exosc3Q7TQK4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Exosc3Q7TQK4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Exosc3Q7TQK4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Exosc3Q7TQK4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.41■■□□□ 1.02
Exosc3Q7TQK4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Exosc3Q7TQK4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.4■■□□□ 1.02
Exosc3Q7TQK4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Exosc3Q7TQK4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Exosc3Q7TQK4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Exosc3Q7TQK4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.38■■□□□ 1.01
Exosc3Q7TQK4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Exosc3Q7TQK4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Exosc3Q7TQK4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.36■■□□□ 1.01
Exosc3Q7TQK4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Exosc3Q7TQK4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Exosc3Q7TQK4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Exosc3Q7TQK4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.35■■□□□ 1.01
Exosc3Q7TQK4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Exosc3Q7TQK4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Exosc3Q7TQK4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Exosc3Q7TQK4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Exosc3Q7TQK4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.34■■□□□ 1.01
Exosc3Q7TQK4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Exosc3Q7TQK4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Exosc3Q7TQK4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Exosc3Q7TQK4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Exosc3Q7TQK4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Exosc3Q7TQK4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Exosc3Q7TQK4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Exosc3Q7TQK4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Exosc3Q7TQK4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Exosc3Q7TQK4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Exosc3Q7TQK4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.32■■□□□ 1
Exosc3Q7TQK4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Exosc3Q7TQK4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Exosc3Q7TQK4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.31■■□□□ 1
Exosc3Q7TQK4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Exosc3Q7TQK4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.31■■□□□ 1
Exosc3Q7TQK4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.3■■□□□ 1
Exosc3Q7TQK4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Exosc3Q7TQK4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Exosc3Q7TQK4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Exosc3Q7TQK4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Exosc3Q7TQK4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Exosc3Q7TQK4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.27■■□□□ 1
Exosc3Q7TQK4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.27■■□□□ 1
Exosc3Q7TQK4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Exosc3Q7TQK4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Exosc3Q7TQK4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Exosc3Q7TQK4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Exosc3Q7TQK4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Exosc3Q7TQK4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Exosc3Q7TQK4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Exosc3Q7TQK4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Exosc3Q7TQK4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Exosc3Q7TQK4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Exosc3Q7TQK4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Exosc3Q7TQK4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Exosc3Q7TQK4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.24■□□□□ 0.99
Exosc3Q7TQK4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Exosc3Q7TQK4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.24■□□□□ 0.99
Exosc3Q7TQK4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Exosc3Q7TQK4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Exosc3Q7TQK4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Exosc3Q7TQK4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.23■□□□□ 0.99
Exosc3Q7TQK4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Exosc3Q7TQK4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Exosc3Q7TQK4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Exosc3Q7TQK4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.22■□□□□ 0.99
Exosc3Q7TQK4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Exosc3Q7TQK4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Exosc3Q7TQK4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.21■□□□□ 0.99
Exosc3Q7TQK4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Exosc3Q7TQK4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Exosc3Q7TQK4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Exosc3Q7TQK4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Exosc3Q7TQK4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Exosc3Q7TQK4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.19■□□□□ 0.98
Exosc3Q7TQK4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Exosc3Q7TQK4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.18■□□□□ 0.98
Exosc3Q7TQK4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Exosc3Q7TQK4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms