Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc36Q6PDM4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc36Q6PDM4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc36Q6PDM4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc36Q6PDM4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc36Q6PDM4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc36Q6PDM4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc36Q6PDM4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc36Q6PDM4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc36Q6PDM4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc36Q6PDM4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc36Q6PDM4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc36Q6PDM4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc36Q6PDM4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc36Q6PDM4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Ccdc36Q6PDM4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc36Q6PDM4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc36Q6PDM4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc36Q6PDM4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc36Q6PDM4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc36Q6PDM4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc36Q6PDM4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc36Q6PDM4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc36Q6PDM4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc36Q6PDM4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc36Q6PDM4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc36Q6PDM4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc36Q6PDM4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc36Q6PDM4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc36Q6PDM4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc36Q6PDM4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc36Q6PDM4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc36Q6PDM4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc36Q6PDM4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc36Q6PDM4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc36Q6PDM4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc36Q6PDM4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc36Q6PDM4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc36Q6PDM4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc36Q6PDM4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc36Q6PDM4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc36Q6PDM4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc36Q6PDM4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc36Q6PDM4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc36Q6PDM4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc36Q6PDM4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc36Q6PDM4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc36Q6PDM4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc36Q6PDM4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc36Q6PDM4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc36Q6PDM4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc36Q6PDM4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.48■□□□□ 0.71
Ccdc36Q6PDM4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc36Q6PDM4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc36Q6PDM4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.46■□□□□ 0.71
Ccdc36Q6PDM4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc36Q6PDM4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc36Q6PDM4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc36Q6PDM4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc36Q6PDM4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc36Q6PDM4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc36Q6PDM4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Gm45855-201ENSMUST00000212546 880 ntBASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc36Q6PDM4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc36Q6PDM4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc36Q6PDM4 Gm9397-201ENSMUST00000200125 605 ntBASIC19.42■□□□□ 0.7
Ccdc36Q6PDM4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc36Q6PDM4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc36Q6PDM4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc36Q6PDM4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc36Q6PDM4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc36Q6PDM4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc36Q6PDM4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms