Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3aQ6PCM1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3aQ6PCM1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Gm45364-201ENSMUST00000210883 159 ntBASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.36■■■□□ 2.13
Kdm3aQ6PCM1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm3aQ6PCM1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm3aQ6PCM1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm3aQ6PCM1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Kdm3aQ6PCM1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Kdm3aQ6PCM1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Kdm3aQ6PCM1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Kdm3aQ6PCM1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Gm11175-201ENSMUST00000116172 543 ntBASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Mir6538-201ENSMUST00000183713 110 ntBASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Kdm3aQ6PCM1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.28■■■□□ 2.12
Kdm3aQ6PCM1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Kdm3aQ6PCM1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Kdm3aQ6PCM1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Gm9812-201ENSMUST00000061934 968 ntBASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.19■■■□□ 2.1
Kdm3aQ6PCM1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Kdm3aQ6PCM1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Kdm3aQ6PCM1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Kdm3aQ6PCM1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Kdm3aQ6PCM1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Kdm3aQ6PCM1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Scarna2-201ENSMUST00000157560 414 ntBASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Gm9806-201ENSMUST00000051080 552 ntBASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.15■■■□□ 2.1
Kdm3aQ6PCM1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Kdm3aQ6PCM1 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.15■■■□□ 2.1
Kdm3aQ6PCM1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Kdm3aQ6PCM1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Kdm3aQ6PCM1 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.14■■■□□ 2.09
Kdm3aQ6PCM1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Kdm3aQ6PCM1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Kdm3aQ6PCM1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Kdm3aQ6PCM1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
Kdm3aQ6PCM1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Kdm3aQ6PCM1 Gm11687-201ENSMUST00000118911 886 ntBASIC28.12■■■□□ 2.09
Kdm3aQ6PCM1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Kdm3aQ6PCM1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.1■■■□□ 2.09
Kdm3aQ6PCM1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Kdm3aQ6PCM1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Kdm3aQ6PCM1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Kdm3aQ6PCM1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Kdm3aQ6PCM1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Kdm3aQ6PCM1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms