Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zfp248Q640N4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zfp248Q640N4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zfp248Q640N4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Zfp248Q640N4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zfp248Q640N4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zfp248Q640N4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.6■□□□□ 0.41
Zfp248Q640N4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zfp248Q640N4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zfp248Q640N4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zfp248Q640N4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zfp248Q640N4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zfp248Q640N4 Particl-201ENSMUST00000205370 1560 ntBASIC17.59■□□□□ 0.41
Zfp248Q640N4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zfp248Q640N4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zfp248Q640N4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zfp248Q640N4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zfp248Q640N4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zfp248Q640N4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zfp248Q640N4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zfp248Q640N4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zfp248Q640N4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.57■□□□□ 0.4
Zfp248Q640N4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zfp248Q640N4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zfp248Q640N4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Zfp248Q640N4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zfp248Q640N4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Zfp248Q640N4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Zfp248Q640N4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zfp248Q640N4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp248Q640N4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp248Q640N4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp248Q640N4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Zfp248Q640N4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp248Q640N4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Zfp248Q640N4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp248Q640N4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp248Q640N4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp248Q640N4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Zfp248Q640N4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp248Q640N4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp248Q640N4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp248Q640N4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp248Q640N4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp248Q640N4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp248Q640N4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.49■□□□□ 0.39
Zfp248Q640N4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Zfp248Q640N4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Zfp248Q640N4 Nkain2-201ENSMUST00000092602 558 ntBASIC17.49■□□□□ 0.39
Zfp248Q640N4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.49■□□□□ 0.39
Zfp248Q640N4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp248Q640N4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp248Q640N4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Zfp248Q640N4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp248Q640N4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp248Q640N4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp248Q640N4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Zfp248Q640N4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zfp248Q640N4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Zfp248Q640N4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zfp248Q640N4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Zfp248Q640N4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zfp248Q640N4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zfp248Q640N4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zfp248Q640N4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.45■□□□□ 0.38
Zfp248Q640N4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Zfp248Q640N4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.45■□□□□ 0.38
Zfp248Q640N4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zfp248Q640N4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zfp248Q640N4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zfp248Q640N4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zfp248Q640N4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zfp248Q640N4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Zfp248Q640N4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zfp248Q640N4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zfp248Q640N4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zfp248Q640N4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.42■□□□□ 0.38
Zfp248Q640N4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zfp248Q640N4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zfp248Q640N4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Zfp248Q640N4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.41■□□□□ 0.38
Zfp248Q640N4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.41■□□□□ 0.38
Zfp248Q640N4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zfp248Q640N4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zfp248Q640N4 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.4■□□□□ 0.38
Zfp248Q640N4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zfp248Q640N4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zfp248Q640N4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.4■□□□□ 0.38
Zfp248Q640N4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Zfp248Q640N4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zfp248Q640N4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Zfp248Q640N4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms