Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.24■■□□□ 1.79
Ddx4Q61496 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx4Q61496 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx4Q61496 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Ddx4Q61496 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.22■■□□□ 1.79
Ddx4Q61496 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ddx4Q61496 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx4Q61496 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.2■■□□□ 1.79
Ddx4Q61496 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Ddx4Q61496 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx4Q61496 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx4Q61496 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Ddx4Q61496 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx4Q61496 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Ddx4Q61496 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Ddx4Q61496 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx4Q61496 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx4Q61496 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx4Q61496 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.18■■□□□ 1.78
Ddx4Q61496 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx4Q61496 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx4Q61496 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx4Q61496 Gm22567-201ENSMUST00000175542 342 ntBASIC26.16■■□□□ 1.78
Ddx4Q61496 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx4Q61496 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx4Q61496 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx4Q61496 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx4Q61496 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Ddx4Q61496 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.15■■□□□ 1.78
Ddx4Q61496 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx4Q61496 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx4Q61496 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx4Q61496 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.14■■□□□ 1.78
Ddx4Q61496 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.14■■□□□ 1.78
Ddx4Q61496 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.14■■□□□ 1.78
Ddx4Q61496 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.14■■□□□ 1.78
Ddx4Q61496 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Ddx4Q61496 Gm9812-201ENSMUST00000061934 968 ntBASIC26.13■■□□□ 1.77
Ddx4Q61496 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Ddx4Q61496 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx4Q61496 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.12■■□□□ 1.77
Ddx4Q61496 Gm5812-201ENSMUST00000061073 957 ntBASIC26.12■■□□□ 1.77
Ddx4Q61496 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx4Q61496 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx4Q61496 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx4Q61496 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.11■■□□□ 1.77
Ddx4Q61496 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx4Q61496 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.09■■□□□ 1.77
Ddx4Q61496 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.09■■□□□ 1.77
Ddx4Q61496 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx4Q61496 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx4Q61496 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Ddx4Q61496 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.77
Ddx4Q61496 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx4Q61496 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx4Q61496 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx4Q61496 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.05■■□□□ 1.76
Ddx4Q61496 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.05■■□□□ 1.76
Ddx4Q61496 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.05■■□□□ 1.76
Ddx4Q61496 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Ddx4Q61496 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx4Q61496 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.04■■□□□ 1.76
Ddx4Q61496 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx4Q61496 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx4Q61496 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.04■■□□□ 1.76
Ddx4Q61496 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.04■■□□□ 1.76
Ddx4Q61496 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx4Q61496 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx4Q61496 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.03■■□□□ 1.76
Ddx4Q61496 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx4Q61496 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.02■■□□□ 1.76
Ddx4Q61496 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx4Q61496 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx4Q61496 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Ddx4Q61496 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx4Q61496 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx4Q61496 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Ddx4Q61496 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx4Q61496 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx4Q61496 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ddx4Q61496 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ddx4Q61496 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx4Q61496 Gm10420-201ENSMUST00000121713 882 ntBASIC25.99■■□□□ 1.75
Ddx4Q61496 Gm5921-201ENSMUST00000075898 882 ntBASIC25.99■■□□□ 1.75
Ddx4Q61496 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx4Q61496 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx4Q61496 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Ddx4Q61496 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
Ddx4Q61496 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.97■■□□□ 1.75
Ddx4Q61496 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx4Q61496 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx4Q61496 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx4Q61496 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Ddx4Q61496 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx4Q61496 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Ddx4Q61496 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ddx4Q61496 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ddx4Q61496 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx4Q61496 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx4Q61496 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms